RNA–Protein interactions for RNA: ENST00000358241.1

RTP2-201, Transcript of receptor transporter protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP2, Length 1,346 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP2-201ENST00000358241 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
RTP2-201ENST00000358241 ABCC9O60706 1549 aa26.92■■□□□ 1.9
RTP2-201ENST00000358241 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
RTP2-201ENST00000358241 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
RTP2-201ENST00000358241 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
RTP2-201ENST00000358241 NACADO15069 1562 aa25.19■■□□□ 1.62
RTP2-201ENST00000358241 PABPN1Q86U42 306 aaKnown RBP eCLIP25.06■■□□□ 1.6
RTP2-201ENST00000358241 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
RTP2-201ENST00000358241 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
RTP2-201ENST00000358241 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
RTP2-201ENST00000358241 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
RTP2-201ENST00000358241 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
RTP2-201ENST00000358241 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
RTP2-201ENST00000358241 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
RTP2-201ENST00000358241 CC2D2AQ9P2K1 1620 aa24.27■■□□□ 1.48
RTP2-201ENST00000358241 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
RTP2-201ENST00000358241 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
RTP2-201ENST00000358241 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
RTP2-201ENST00000358241 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
RTP2-201ENST00000358241 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
RTP2-201ENST00000358241 CUX2O14529 1486 aa23.27■■□□□ 1.31
RTP2-201ENST00000358241 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
RTP2-201ENST00000358241 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
RTP2-201ENST00000358241 NESP48681 1621 aa23.08■■□□□ 1.29
RTP2-201ENST00000358241 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
RTP2-201ENST00000358241 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
RTP2-201ENST00000358241 SMARCA2P51531 1590 aa23.07■■□□□ 1.28
RTP2-201ENST00000358241 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
RTP2-201ENST00000358241 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
RTP2-201ENST00000358241 PEG3Q9GZU2 1588 aa22.87■■□□□ 1.25
RTP2-201ENST00000358241 THOC2Q8NI27 1593 aaKnown RBP22.85■■□□□ 1.25
RTP2-201ENST00000358241 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
RTP2-201ENST00000358241 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
RTP2-201ENST00000358241 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
RTP2-201ENST00000358241 PDS5BQ9NTI5 1447 aa22.67■■□□□ 1.22
RTP2-201ENST00000358241 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
RTP2-201ENST00000358241 MRC2Q9UBG0 1479 aa22.51■■□□□ 1.19
RTP2-201ENST00000358241 WDR62O43379 1518 aa22.47■■□□□ 1.19
RTP2-201ENST00000358241 WIZO95785 1651 aa22.46■■□□□ 1.19
RTP2-201ENST00000358241 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
RTP2-201ENST00000358241 CEP164Q9UPV0 1460 aa22.35■■□□□ 1.17
RTP2-201ENST00000358241 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
RTP2-201ENST00000358241 CFTRP13569 1480 aa22.28■■□□□ 1.16
RTP2-201ENST00000358241 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
RTP2-201ENST00000358241 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.15
RTP2-201ENST00000358241 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
RTP2-201ENST00000358241 TOP2AP11388 1531 aaKnown RBP22.14■■□□□ 1.13
RTP2-201ENST00000358241 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
RTP2-201ENST00000358241 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
RTP2-201ENST00000358241 RIMBP3CA6NJZ7 1639 aa21.93■■□□□ 1.1
RTP2-201ENST00000358241 RIMBP3BA6NNM3 1639 aa21.93■■□□□ 1.1
RTP2-201ENST00000358241 RIMBP3Q9UFD9 1639 aa21.93■■□□□ 1.1
RTP2-201ENST00000358241 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
RTP2-201ENST00000358241 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
RTP2-201ENST00000358241 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
RTP2-201ENST00000358241 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
RTP2-201ENST00000358241 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
RTP2-201ENST00000358241 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
RTP2-201ENST00000358241 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
RTP2-201ENST00000358241 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
RTP2-201ENST00000358241 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
RTP2-201ENST00000358241 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
RTP2-201ENST00000358241 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
RTP2-201ENST00000358241 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
RTP2-201ENST00000358241 CHD1O14646 1710 aa21.63■■□□□ 1.05
RTP2-201ENST00000358241 FBLN2P98095 1184 aa21.59■■□□□ 1.05
RTP2-201ENST00000358241 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
RTP2-201ENST00000358241 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
RTP2-201ENST00000358241 SOGA1O94964 1423 aa21.53■■□□□ 1.04
RTP2-201ENST00000358241 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
RTP2-201ENST00000358241 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
RTP2-201ENST00000358241 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
RTP2-201ENST00000358241 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
RTP2-201ENST00000358241 CUX1P39880 1505 aa21.42■■□□□ 1.02
RTP2-201ENST00000358241 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
RTP2-201ENST00000358241 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
RTP2-201ENST00000358241 MAGI1Q96QZ7 1491 aaPredicted RBP21.37■■□□□ 1.01
RTP2-201ENST00000358241 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
RTP2-201ENST00000358241 SYNJ1O43426 1573 aa21.33■■□□□ 1
RTP2-201ENST00000358241 SYNJ2O15056 1496 aa21.32■■□□□ 1
RTP2-201ENST00000358241 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
RTP2-201ENST00000358241 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
RTP2-201ENST00000358241 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
RTP2-201ENST00000358241 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
RTP2-201ENST00000358241 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.97
RTP2-201ENST00000358241 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
RTP2-201ENST00000358241 NUP160Q12769 1436 aa21.06■□□□□ 0.96
RTP2-201ENST00000358241 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
RTP2-201ENST00000358241 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
RTP2-201ENST00000358241 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
RTP2-201ENST00000358241 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
RTP2-201ENST00000358241 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
RTP2-201ENST00000358241 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
RTP2-201ENST00000358241 FHAD1B1AJZ9 1412 aa20.96■□□□□ 0.95
RTP2-201ENST00000358241 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
RTP2-201ENST00000358241 BIVM-ERCC5R4GMW8 1640 aa20.94■□□□□ 0.94
RTP2-201ENST00000358241 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
RTP2-201ENST00000358241 PRG4Q92954 1404 aaPredicted RBP20.86■□□□□ 0.93
RTP2-201ENST00000358241 JPH4Q96JJ6 628 aa20.83■□□□□ 0.93
RTP2-201ENST00000358241 KIF13AQ9H1H9 1805 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms