RNA–Protein interactions for RNA: ENST00000357726.4

PRAMEF12-201, Transcript of PRAME family member 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRAMEF12, Length 1,786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF12-201ENST00000357726 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
PRAMEF12-201ENST00000357726 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
PRAMEF12-201ENST00000357726 ABCC9O60706 1549 aa24.7■■□□□ 1.54
PRAMEF12-201ENST00000357726 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
PRAMEF12-201ENST00000357726 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
PRAMEF12-201ENST00000357726 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
PRAMEF12-201ENST00000357726 NACADO15069 1562 aa24.06■■□□□ 1.44
PRAMEF12-201ENST00000357726 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
PRAMEF12-201ENST00000357726 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
PRAMEF12-201ENST00000357726 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
PRAMEF12-201ENST00000357726 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
PRAMEF12-201ENST00000357726 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
PRAMEF12-201ENST00000357726 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
PRAMEF12-201ENST00000357726 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.3
PRAMEF12-201ENST00000357726 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
PRAMEF12-201ENST00000357726 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.21
PRAMEF12-201ENST00000357726 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
PRAMEF12-201ENST00000357726 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
PRAMEF12-201ENST00000357726 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
PRAMEF12-201ENST00000357726 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.18
PRAMEF12-201ENST00000357726 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
PRAMEF12-201ENST00000357726 WIZO95785 1651 aa22.31■■□□□ 1.16
PRAMEF12-201ENST00000357726 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
PRAMEF12-201ENST00000357726 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
PRAMEF12-201ENST00000357726 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
PRAMEF12-201ENST00000357726 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
PRAMEF12-201ENST00000357726 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
PRAMEF12-201ENST00000357726 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
PRAMEF12-201ENST00000357726 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
PRAMEF12-201ENST00000357726 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
PRAMEF12-201ENST00000357726 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
PRAMEF12-201ENST00000357726 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
PRAMEF12-201ENST00000357726 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
PRAMEF12-201ENST00000357726 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
PRAMEF12-201ENST00000357726 CFTRP13569 1480 aa21.53■■□□□ 1.04
PRAMEF12-201ENST00000357726 NESP48681 1621 aa21.52■■□□□ 1.04
PRAMEF12-201ENST00000357726 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
PRAMEF12-201ENST00000357726 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
PRAMEF12-201ENST00000357726 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1.01
PRAMEF12-201ENST00000357726 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
PRAMEF12-201ENST00000357726 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
PRAMEF12-201ENST00000357726 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
PRAMEF12-201ENST00000357726 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
PRAMEF12-201ENST00000357726 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
PRAMEF12-201ENST00000357726 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
PRAMEF12-201ENST00000357726 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
PRAMEF12-201ENST00000357726 URB2Q14146 1524 aaKnown RBP21.08■□□□□ 0.97
PRAMEF12-201ENST00000357726 CUX1P39880 1505 aa21.07■□□□□ 0.96
PRAMEF12-201ENST00000357726 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
PRAMEF12-201ENST00000357726 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
PRAMEF12-201ENST00000357726 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
PRAMEF12-201ENST00000357726 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
PRAMEF12-201ENST00000357726 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
PRAMEF12-201ENST00000357726 WDR62O43379 1518 aa21.03■□□□□ 0.96
PRAMEF12-201ENST00000357726 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
PRAMEF12-201ENST00000357726 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
PRAMEF12-201ENST00000357726 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
PRAMEF12-201ENST00000357726 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
PRAMEF12-201ENST00000357726 CUX2O14529 1486 aa20.83■□□□□ 0.92
PRAMEF12-201ENST00000357726 SOGA1O94964 1423 aa20.81■□□□□ 0.92
PRAMEF12-201ENST00000357726 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
PRAMEF12-201ENST00000357726 TARBP1Q13395 1621 aaKnown RBP20.79■□□□□ 0.92
PRAMEF12-201ENST00000357726 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
PRAMEF12-201ENST00000357726 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
PRAMEF12-201ENST00000357726 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
PRAMEF12-201ENST00000357726 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
PRAMEF12-201ENST00000357726 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
PRAMEF12-201ENST00000357726 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
PRAMEF12-201ENST00000357726 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
PRAMEF12-201ENST00000357726 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
PRAMEF12-201ENST00000357726 RUSC2Q8N2Y8 1516 aa20.61■□□□□ 0.89
PRAMEF12-201ENST00000357726 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.89
PRAMEF12-201ENST00000357726 GAPVD1Q14C86 1478 aa20.59■□□□□ 0.89
PRAMEF12-201ENST00000357726 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
PRAMEF12-201ENST00000357726 EEA1Q15075 1411 aa20.56■□□□□ 0.88
PRAMEF12-201ENST00000357726 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
PRAMEF12-201ENST00000357726 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
PRAMEF12-201ENST00000357726 ERICH3Q5RHP9 1530 aa20.5■□□□□ 0.87
PRAMEF12-201ENST00000357726 IGF1RP08069 1367 aa20.46■□□□□ 0.87
PRAMEF12-201ENST00000357726 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
PRAMEF12-201ENST00000357726 CUL7Q14999 1698 aa20.44■□□□□ 0.86
PRAMEF12-201ENST00000357726 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
PRAMEF12-201ENST00000357726 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
PRAMEF12-201ENST00000357726 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
PRAMEF12-201ENST00000357726 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
PRAMEF12-201ENST00000357726 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
PRAMEF12-201ENST00000357726 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
PRAMEF12-201ENST00000357726 KIF21BO75037 1637 aa20.34■□□□□ 0.85
PRAMEF12-201ENST00000357726 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
PRAMEF12-201ENST00000357726 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
PRAMEF12-201ENST00000357726 CHD1O14646 1710 aa20.3■□□□□ 0.84
PRAMEF12-201ENST00000357726 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
PRAMEF12-201ENST00000357726 FBLN2P98095 1184 aa20.27■□□□□ 0.84
PRAMEF12-201ENST00000357726 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
PRAMEF12-201ENST00000357726 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
PRAMEF12-201ENST00000357726 GOLGA3Q08378 1498 aa20.25■□□□□ 0.83
PRAMEF12-201ENST00000357726 CTTNBP2Q8WZ74 1663 aa20.17■□□□□ 0.82
PRAMEF12-201ENST00000357726 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
PRAMEF12-201ENST00000357726 UBTFP17480 764 aaKnown RBP20.16■□□□□ 0.82
PRAMEF12-201ENST00000357726 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms