RNA–Protein interactions for RNA: ENST00000356456.9

ZNF140-203, Transcript of zinc finger protein 140, humanhuman

TSL 3

Gene ZNF140, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140-203ENST00000356456 NISCHQ9Y2I1 1504 aa53.71■■■■■ 6.19
ZNF140-203ENST00000356456 ABCC9O60706 1549 aa48.75■■■■■ 5.39
ZNF140-203ENST00000356456 CCDC180Q9P1Z9 1646 aa48.31■■■■■ 5.32
ZNF140-203ENST00000356456 RB1CC1Q8TDY2 1594 aa46.17■■■■■ 4.98
ZNF140-203ENST00000356456 DNAJC5BQ9UF47 199 aa46.12■■■■■ 4.97
ZNF140-203ENST00000356456 NACADO15069 1562 aa45.77■■■■■ 4.92
ZNF140-203ENST00000356456 DCAF8L2P0C7V8 631 aa45.45■■■■■ 4.87
ZNF140-203ENST00000356456 PABPN1Q86U42 306 aaKnown RBP eCLIP45.34■■■■■ 4.85
ZNF140-203ENST00000356456 UNC13AQ9UPW8 1703 aa45.16■■■■■ 4.82
ZNF140-203ENST00000356456 MYO15BQ96JP2 1530 aa45.02■■■■■ 4.8
ZNF140-203ENST00000356456 BICRAQ9NZM4 1560 aa44.93■■■■■ 4.78
ZNF140-203ENST00000356456 ZCCHC6Q5VYS8 1495 aaKnown RBP44.45■■■■■ 4.71
ZNF140-203ENST00000356456 DCAF1Q9Y4B6 1507 aa44.32■■■■■ 4.69
ZNF140-203ENST00000356456 SHROOM4Q9ULL8 1493 aa44.2■■■■■ 4.67
ZNF140-203ENST00000356456 SCRIBQ14160 1630 aa44.06■■■■■ 4.64
ZNF140-203ENST00000356456 CC2D2AQ9P2K1 1620 aa44■■■■■ 4.63
ZNF140-203ENST00000356456 CECR2Q9BXF3 1484 aa43.94■■■■■ 4.62
ZNF140-203ENST00000356456 EIF4G1Q04637 1599 aaKnown RBP43.82■■■■■ 4.61
ZNF140-203ENST00000356456 DNAJC5Q9H3Z4 198 aa42.55■■■■■ 4.4
ZNF140-203ENST00000356456 NCAPD3P42695 1498 aa42.29■■■■■ 4.36
ZNF140-203ENST00000356456 ATAD2BQ9ULI0 1458 aa42.13■■■■■ 4.34
ZNF140-203ENST00000356456 CUX2O14529 1486 aa42.12■■■■■ 4.33
ZNF140-203ENST00000356456 ERCC6Q03468 1493 aa42.07■■■■■ 4.33
ZNF140-203ENST00000356456 SMARCA4P51532 1647 aa41.98■■■■■ 4.31
ZNF140-203ENST00000356456 SMARCA2P51531 1590 aa41.93■■■■■ 4.3
ZNF140-203ENST00000356456 HMGXB3Q12766 1538 aa41.93■■■■■ 4.3
ZNF140-203ENST00000356456 NESP48681 1621 aa41.8■■■■■ 4.28
ZNF140-203ENST00000356456 BAZ1AQ9NRL2 1556 aaPredicted RBP41.68■■■■■ 4.26
ZNF140-203ENST00000356456 BAZ1BQ9UIG0 1483 aaKnown RBP41.67■■■■■ 4.26
ZNF140-203ENST00000356456 PEG3Q9GZU2 1588 aa41.57■■■■■ 4.25
ZNF140-203ENST00000356456 THOC2Q8NI27 1593 aaKnown RBP41.42■■■■■ 4.22
ZNF140-203ENST00000356456 MROH2BQ7Z745 1585 aa41.42■■■■■ 4.22
ZNF140-203ENST00000356456 LAMC3Q9Y6N6 1575 aa41.36■■■■■ 4.21
ZNF140-203ENST00000356456 KIF21AQ7Z4S6 1674 aa41.2■■■■■ 4.19
ZNF140-203ENST00000356456 PDS5BQ9NTI5 1447 aa41.13■■■■■ 4.17
ZNF140-203ENST00000356456 CADPSQ9ULU8 1353 aa40.98■■■■■ 4.15
ZNF140-203ENST00000356456 WIZO95785 1651 aa40.88■■■■■ 4.13
ZNF140-203ENST00000356456 MRC2Q9UBG0 1479 aa40.83■■■■■ 4.13
ZNF140-203ENST00000356456 WDR62O43379 1518 aa40.76■■■■■ 4.12
ZNF140-203ENST00000356456 CEP164Q9UPV0 1460 aa40.59■■■■■ 4.09
ZNF140-203ENST00000356456 FANCD2Q9BXW9 1451 aa40.53■■■■■ 4.08
ZNF140-203ENST00000356456 TRIM41Q8WV44 630 aa40.53■■■■■ 4.08
ZNF140-203ENST00000356456 CFTRP13569 1480 aa40.45■■■■■ 4.07
ZNF140-203ENST00000356456 RSF1Q96T23 1441 aaPredicted RBP40.42■■■■■ 4.06
ZNF140-203ENST00000356456 TOP2AP11388 1531 aaKnown RBP40.32■■■■■ 4.05
ZNF140-203ENST00000356456 URB2Q14146 1524 aaKnown RBP40.26■■■■■ 4.04
ZNF140-203ENST00000356456 OSCARQ8IYS5 282 aa40.11■■■■■ 4.01
ZNF140-203ENST00000356456 PRDM2Q13029 1718 aa39.95■■■■□ 3.99
ZNF140-203ENST00000356456 CCDC88BA6NC98 1476 aa39.89■■■■□ 3.98
ZNF140-203ENST00000356456 ZNF608Q9ULD9 1512 aaPredicted RBP39.83■■■■□ 3.97
ZNF140-203ENST00000356456 IFT140Q96RY7 1462 aa39.79■■■■□ 3.96
ZNF140-203ENST00000356456 TOPBP1Q92547 1522 aa39.73■■■■□ 3.95
ZNF140-203ENST00000356456 RIMBP3CA6NJZ7 1639 aa39.69■■■■□ 3.94
ZNF140-203ENST00000356456 RIMBP3BA6NNM3 1639 aa39.69■■■■□ 3.94
ZNF140-203ENST00000356456 RIMBP3Q9UFD9 1639 aa39.69■■■■□ 3.94
ZNF140-203ENST00000356456 EIF4G3O43432 1585 aaKnown RBP39.55■■■■□ 3.92
ZNF140-203ENST00000356456 ABCC8Q09428 1581 aa39.54■■■■□ 3.92
ZNF140-203ENST00000356456 ARHGEF11O15085 1522 aa39.53■■■■□ 3.92
ZNF140-203ENST00000356456 DNMBPQ6XZF7 1577 aa39.53■■■■□ 3.92
ZNF140-203ENST00000356456 TARBP1Q13395 1621 aaKnown RBP39.41■■■■□ 3.9
ZNF140-203ENST00000356456 AQRO60306 1485 aaKnown RBP eCLIP39.4■■■■□ 3.96e-7■■□□□ 11.9
ZNF140-203ENST00000356456 CHD1O14646 1710 aa39.31■■■■□ 3.88
ZNF140-203ENST00000356456 POLA1P09884 1462 aaPredicted RBP39.31■■■■□ 3.88
ZNF140-203ENST00000356456 CYB5RLQ6IPT4 315 aa39.24■■■■□ 3.87
ZNF140-203ENST00000356456 RAD54L2Q9Y4B4 1467 aa39.18■■■■□ 3.86
ZNF140-203ENST00000356456 FBLN2P98095 1184 aa39.16■■■■□ 3.86
ZNF140-203ENST00000356456 ARAP1Q96P48 1450 aa39.15■■■■□ 3.86
ZNF140-203ENST00000356456 TDRD9Q8NDG6 1382 aaKnown RBP39.09■■■■□ 3.85
ZNF140-203ENST00000356456 SOGA1O94964 1423 aa39.09■■■■□ 3.85
ZNF140-203ENST00000356456 FGD5Q6ZNL6 1462 aa39■■■■□ 3.83
ZNF140-203ENST00000356456 SNAPC4Q5SXM2 1469 aa38.98■■■■□ 3.83
ZNF140-203ENST00000356456 CUX1P39880 1505 aa38.94■■■■□ 3.82
ZNF140-203ENST00000356456 WDR97A6NE52 1622 aa38.92■■■■□ 3.82
ZNF140-203ENST00000356456 CLASP1Q7Z460 1538 aa38.89■■■■□ 3.82
ZNF140-203ENST00000356456 TRHP20396 242 aaPredicted RBP38.88■■■■□ 3.81
ZNF140-203ENST00000356456 MAGI1Q96QZ7 1491 aaPredicted RBP38.82■■■■□ 3.81
ZNF140-203ENST00000356456 CHMP7Q8WUX9 453 aaPredicted RBP38.8■■■■□ 3.8
ZNF140-203ENST00000356456 GRIN2BQ13224 1484 aa38.79■■■■□ 3.8
ZNF140-203ENST00000356456 SYNJ1O43426 1573 aa38.77■■■■□ 3.8
ZNF140-203ENST00000356456 SYNJ2O15056 1496 aa38.72■■■■□ 3.79
ZNF140-203ENST00000356456 GAPVD1Q14C86 1478 aa38.61■■■■□ 3.77
ZNF140-203ENST00000356456 PBRM1Q86U86 1689 aa38.61■■■■□ 3.77
ZNF140-203ENST00000356456 ABCA10Q8WWZ4 1543 aa38.53■■■■□ 3.76
ZNF140-203ENST00000356456 ABCA5Q8WWZ7 1642 aa38.52■■■■□ 3.76
ZNF140-203ENST00000356456 GRIN2AQ12879 1464 aa38.31■■■■□ 3.72
ZNF140-203ENST00000356456 SUPT5HO00267 1087 aaKnown RBP38.31■■■■□ 3.72
ZNF140-203ENST00000356456 ERCC6L2Q5T890 1561 aa38.3■■■■□ 3.72
ZNF140-203ENST00000356456 WRNQ14191 1432 aaPredicted RBP eCLIP38.28■■■■□ 3.72
ZNF140-203ENST00000356456 ADAMTS12P58397 1594 aa38.26■■■■□ 3.72
ZNF140-203ENST00000356456 CEP170Q5SW79 1584 aa38.22■■■■□ 3.71
ZNF140-203ENST00000356456 NUP160Q12769 1436 aa38.21■■■■□ 3.71
ZNF140-203ENST00000356456 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
ZNF140-203ENST00000356456 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
ZNF140-203ENST00000356456 FHAD1B1AJZ9 1412 aa38.11■■■■□ 3.69
ZNF140-203ENST00000356456 SHROOM2Q13796 1616 aa38.07■■■■□ 3.68
ZNF140-203ENST00000356456 ERICH3Q5RHP9 1530 aa38.02■■■■□ 3.68
ZNF140-203ENST00000356456 AEBP2Q6ZN18 517 aaPredicted RBP37.99■■■■□ 3.67
ZNF140-203ENST00000356456 PRG4Q92954 1404 aaPredicted RBP37.86■■■■□ 3.65
ZNF140-203ENST00000356456 JPH4Q96JJ6 628 aa37.78■■■■□ 3.64
ZNF140-203ENST00000356456 KIF13AQ9H1H9 1805 aa37.75■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms