RNA–Protein interactions for RNA: ENST00000355768.6

PER2-202, Transcript of period circadian regulator 2, humanhuman

TSL 1 (best)

Gene PER2, Length 1,228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER2-202ENST00000355768 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
PER2-202ENST00000355768 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
PER2-202ENST00000355768 ABCC9O60706 1549 aa27.15■■□□□ 1.94
PER2-202ENST00000355768 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
PER2-202ENST00000355768 NACADO15069 1562 aa25.95■■□□□ 1.75
PER2-202ENST00000355768 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
PER2-202ENST00000355768 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
PER2-202ENST00000355768 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
PER2-202ENST00000355768 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
PER2-202ENST00000355768 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
PER2-202ENST00000355768 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
PER2-202ENST00000355768 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
PER2-202ENST00000355768 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
PER2-202ENST00000355768 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
PER2-202ENST00000355768 SCRIBQ14160 1630 aa24.96■■□□□ 1.59
PER2-202ENST00000355768 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
PER2-202ENST00000355768 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
PER2-202ENST00000355768 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
PER2-202ENST00000355768 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
PER2-202ENST00000355768 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
PER2-202ENST00000355768 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
PER2-202ENST00000355768 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
PER2-202ENST00000355768 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
PER2-202ENST00000355768 HMGXB3Q12766 1538 aa23.8■■□□□ 1.4
PER2-202ENST00000355768 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
PER2-202ENST00000355768 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
PER2-202ENST00000355768 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
PER2-202ENST00000355768 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
PER2-202ENST00000355768 CUX2O14529 1486 aa23.45■■□□□ 1.34
PER2-202ENST00000355768 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
PER2-202ENST00000355768 NESP48681 1621 aa23.37■■□□□ 1.33
PER2-202ENST00000355768 WIZO95785 1651 aa23.34■■□□□ 1.33
PER2-202ENST00000355768 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
PER2-202ENST00000355768 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
PER2-202ENST00000355768 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
PER2-202ENST00000355768 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
PER2-202ENST00000355768 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
PER2-202ENST00000355768 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
PER2-202ENST00000355768 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.29
PER2-202ENST00000355768 MRC2Q9UBG0 1479 aa22.97■■□□□ 1.27
PER2-202ENST00000355768 CFTRP13569 1480 aa22.95■■□□□ 1.26
PER2-202ENST00000355768 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
PER2-202ENST00000355768 WDR62O43379 1518 aa22.94■■□□□ 1.26
PER2-202ENST00000355768 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
PER2-202ENST00000355768 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
PER2-202ENST00000355768 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
PER2-202ENST00000355768 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
PER2-202ENST00000355768 ABCC8Q09428 1581 aa22.52■■□□□ 1.2
PER2-202ENST00000355768 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
PER2-202ENST00000355768 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
PER2-202ENST00000355768 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
PER2-202ENST00000355768 ZNF608Q9ULD9 1512 aaPredicted RBP22.32■■□□□ 1.16
PER2-202ENST00000355768 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
PER2-202ENST00000355768 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
PER2-202ENST00000355768 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
PER2-202ENST00000355768 POLA1P09884 1462 aaPredicted RBP22.26■■□□□ 1.15
PER2-202ENST00000355768 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
PER2-202ENST00000355768 CHD1O14646 1710 aa22.15■■□□□ 1.14
PER2-202ENST00000355768 CUX1P39880 1505 aa22.15■■□□□ 1.14
PER2-202ENST00000355768 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
PER2-202ENST00000355768 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.131e-6■■■■■ 26.9
PER2-202ENST00000355768 SOGA1O94964 1423 aa22.12■■□□□ 1.13
PER2-202ENST00000355768 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
PER2-202ENST00000355768 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
PER2-202ENST00000355768 RIMBP3CA6NJZ7 1639 aa22.08■■□□□ 1.13
PER2-202ENST00000355768 RIMBP3BA6NNM3 1639 aa22.08■■□□□ 1.13
PER2-202ENST00000355768 RIMBP3Q9UFD9 1639 aa22.08■■□□□ 1.13
PER2-202ENST00000355768 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
PER2-202ENST00000355768 ARHGEF11O15085 1522 aa22■■□□□ 1.11
PER2-202ENST00000355768 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
PER2-202ENST00000355768 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
PER2-202ENST00000355768 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
PER2-202ENST00000355768 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
PER2-202ENST00000355768 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
PER2-202ENST00000355768 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
PER2-202ENST00000355768 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
PER2-202ENST00000355768 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
PER2-202ENST00000355768 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
PER2-202ENST00000355768 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
PER2-202ENST00000355768 GAPVD1Q14C86 1478 aa21.89■■□□□ 1.09
PER2-202ENST00000355768 CLASP1Q7Z460 1538 aa21.87■■□□□ 1.09
PER2-202ENST00000355768 FBLN2P98095 1184 aa21.87■■□□□ 1.09
PER2-202ENST00000355768 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
PER2-202ENST00000355768 WRNQ14191 1432 aaPredicted RBP eCLIP21.84■■□□□ 1.09
PER2-202ENST00000355768 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
PER2-202ENST00000355768 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
PER2-202ENST00000355768 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
PER2-202ENST00000355768 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
PER2-202ENST00000355768 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
PER2-202ENST00000355768 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
PER2-202ENST00000355768 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
PER2-202ENST00000355768 NUP160Q12769 1436 aa21.61■■□□□ 1.05
PER2-202ENST00000355768 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
PER2-202ENST00000355768 SHROOM2Q13796 1616 aa21.57■■□□□ 1.04
PER2-202ENST00000355768 CUL7Q14999 1698 aa21.47■■□□□ 1.03
PER2-202ENST00000355768 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.02
PER2-202ENST00000355768 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
PER2-202ENST00000355768 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
PER2-202ENST00000355768 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
PER2-202ENST00000355768 IGF1RP08069 1367 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms