RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
NPHP1-202ENST00000355301 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
NPHP1-202ENST00000355301 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
NPHP1-202ENST00000355301 ABCC9O60706 1549 aa18.45■□□□□ 0.54
NPHP1-202ENST00000355301 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
NPHP1-202ENST00000355301 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
NPHP1-202ENST00000355301 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
NPHP1-202ENST00000355301 NACADO15069 1562 aa18.13■□□□□ 0.49
NPHP1-202ENST00000355301 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
NPHP1-202ENST00000355301 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
NPHP1-202ENST00000355301 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
NPHP1-202ENST00000355301 UNC13AQ9UPW8 1703 aa17.63■□□□□ 0.41
NPHP1-202ENST00000355301 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
NPHP1-202ENST00000355301 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
NPHP1-202ENST00000355301 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
NPHP1-202ENST00000355301 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
NPHP1-202ENST00000355301 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
NPHP1-202ENST00000355301 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
NPHP1-202ENST00000355301 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
NPHP1-202ENST00000355301 SMARCA4P51532 1647 aa17.08■□□□□ 0.33
NPHP1-202ENST00000355301 WIZO95785 1651 aa16.96■□□□□ 0.31
NPHP1-202ENST00000355301 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
NPHP1-202ENST00000355301 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
NPHP1-202ENST00000355301 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
NPHP1-202ENST00000355301 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
NPHP1-202ENST00000355301 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
NPHP1-202ENST00000355301 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
NPHP1-202ENST00000355301 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
NPHP1-202ENST00000355301 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
NPHP1-202ENST00000355301 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
NPHP1-202ENST00000355301 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
NPHP1-202ENST00000355301 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
NPHP1-202ENST00000355301 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
NPHP1-202ENST00000355301 CFTRP13569 1480 aa16.32■□□□□ 0.2
NPHP1-202ENST00000355301 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
NPHP1-202ENST00000355301 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
NPHP1-202ENST00000355301 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
NPHP1-202ENST00000355301 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
NPHP1-202ENST00000355301 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
NPHP1-202ENST00000355301 NESP48681 1621 aa16.15■□□□□ 0.18
NPHP1-202ENST00000355301 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
NPHP1-202ENST00000355301 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
NPHP1-202ENST00000355301 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
NPHP1-202ENST00000355301 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
NPHP1-202ENST00000355301 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
NPHP1-202ENST00000355301 BIVM-ERCC5R4GMW8 1640 aa16.03■□□□□ 0.16
NPHP1-202ENST00000355301 CUX1P39880 1505 aa16.01■□□□□ 0.15
NPHP1-202ENST00000355301 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
NPHP1-202ENST00000355301 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
NPHP1-202ENST00000355301 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
NPHP1-202ENST00000355301 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
NPHP1-202ENST00000355301 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
NPHP1-202ENST00000355301 SOGA1O94964 1423 aa15.86■□□□□ 0.13
NPHP1-202ENST00000355301 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
NPHP1-202ENST00000355301 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
NPHP1-202ENST00000355301 EEA1Q15075 1411 aa15.85■□□□□ 0.13
NPHP1-202ENST00000355301 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
NPHP1-202ENST00000355301 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
NPHP1-202ENST00000355301 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
NPHP1-202ENST00000355301 RUSC2Q8N2Y8 1516 aa15.8■□□□□ 0.12
NPHP1-202ENST00000355301 WDR62O43379 1518 aa15.79■□□□□ 0.12
NPHP1-202ENST00000355301 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.12
NPHP1-202ENST00000355301 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
NPHP1-202ENST00000355301 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
NPHP1-202ENST00000355301 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
NPHP1-202ENST00000355301 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
NPHP1-202ENST00000355301 CUX2O14529 1486 aa15.72■□□□□ 0.11
NPHP1-202ENST00000355301 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
NPHP1-202ENST00000355301 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
NPHP1-202ENST00000355301 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
NPHP1-202ENST00000355301 KIF21BO75037 1637 aa15.64■□□□□ 0.09
NPHP1-202ENST00000355301 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
NPHP1-202ENST00000355301 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
NPHP1-202ENST00000355301 IGF1RP08069 1367 aa15.62■□□□□ 0.09
NPHP1-202ENST00000355301 PRXQ9BXM0 1461 aa15.61■□□□□ 0.09
NPHP1-202ENST00000355301 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
NPHP1-202ENST00000355301 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
NPHP1-202ENST00000355301 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.09
NPHP1-202ENST00000355301 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.08
NPHP1-202ENST00000355301 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
NPHP1-202ENST00000355301 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
NPHP1-202ENST00000355301 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
NPHP1-202ENST00000355301 CUL7Q14999 1698 aa15.53■□□□□ 0.08
NPHP1-202ENST00000355301 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.08
NPHP1-202ENST00000355301 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
NPHP1-202ENST00000355301 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
NPHP1-202ENST00000355301 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
NPHP1-202ENST00000355301 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
NPHP1-202ENST00000355301 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
NPHP1-202ENST00000355301 UBTFP17480 764 aaKnown RBP15.49■□□□□ 0.07
NPHP1-202ENST00000355301 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
NPHP1-202ENST00000355301 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
NPHP1-202ENST00000355301 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
NPHP1-202ENST00000355301 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
NPHP1-202ENST00000355301 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
NPHP1-202ENST00000355301 CLIP1P30622 1438 aa15.33■□□□□ 0.04
NPHP1-202ENST00000355301 CTTNBP2Q8WZ74 1663 aa15.33■□□□□ 0.04
NPHP1-202ENST00000355301 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
NPHP1-202ENST00000355301 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
NPHP1-202ENST00000355301 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms