RNA–Protein interactions for RNA: ENST00000355203.6

CXorf40B-201, Transcript of chromosome X open reading frame 40B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXorf40B, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40B-201ENST00000355203 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
CXorf40B-201ENST00000355203 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.82
CXorf40B-201ENST00000355203 ABCC9O60706 1549 aa26.26■■□□□ 1.79
CXorf40B-201ENST00000355203 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
CXorf40B-201ENST00000355203 NACADO15069 1562 aa24.95■■□□□ 1.58
CXorf40B-201ENST00000355203 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
CXorf40B-201ENST00000355203 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
CXorf40B-201ENST00000355203 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
CXorf40B-201ENST00000355203 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
CXorf40B-201ENST00000355203 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
CXorf40B-201ENST00000355203 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
CXorf40B-201ENST00000355203 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
CXorf40B-201ENST00000355203 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
CXorf40B-201ENST00000355203 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
CXorf40B-201ENST00000355203 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
CXorf40B-201ENST00000355203 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
CXorf40B-201ENST00000355203 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
CXorf40B-201ENST00000355203 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
CXorf40B-201ENST00000355203 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
CXorf40B-201ENST00000355203 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
CXorf40B-201ENST00000355203 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
CXorf40B-201ENST00000355203 SMARCA2P51531 1590 aa22.89■■□□□ 1.26
CXorf40B-201ENST00000355203 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
CXorf40B-201ENST00000355203 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
CXorf40B-201ENST00000355203 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
CXorf40B-201ENST00000355203 CUX2O14529 1486 aa22.7■■□□□ 1.22
CXorf40B-201ENST00000355203 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
CXorf40B-201ENST00000355203 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
CXorf40B-201ENST00000355203 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.22
CXorf40B-201ENST00000355203 DNAJC5Q9H3Z4 198 aa22.6■■□□□ 1.21
CXorf40B-201ENST00000355203 NESP48681 1621 aa22.58■■□□□ 1.21
CXorf40B-201ENST00000355203 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
CXorf40B-201ENST00000355203 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
CXorf40B-201ENST00000355203 PDS5BQ9NTI5 1447 aa22.35■■□□□ 1.17
CXorf40B-201ENST00000355203 WIZO95785 1651 aa22.33■■□□□ 1.16
CXorf40B-201ENST00000355203 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
CXorf40B-201ENST00000355203 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
CXorf40B-201ENST00000355203 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
CXorf40B-201ENST00000355203 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
CXorf40B-201ENST00000355203 WDR62O43379 1518 aa22.12■■□□□ 1.13
CXorf40B-201ENST00000355203 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
CXorf40B-201ENST00000355203 CFTRP13569 1480 aa22.09■■□□□ 1.13
CXorf40B-201ENST00000355203 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
CXorf40B-201ENST00000355203 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
CXorf40B-201ENST00000355203 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
CXorf40B-201ENST00000355203 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
CXorf40B-201ENST00000355203 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
CXorf40B-201ENST00000355203 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
CXorf40B-201ENST00000355203 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
CXorf40B-201ENST00000355203 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
CXorf40B-201ENST00000355203 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
CXorf40B-201ENST00000355203 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
CXorf40B-201ENST00000355203 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
CXorf40B-201ENST00000355203 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
CXorf40B-201ENST00000355203 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
CXorf40B-201ENST00000355203 TARBP1Q13395 1621 aaKnown RBP21.45■■□□□ 1.02
CXorf40B-201ENST00000355203 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
CXorf40B-201ENST00000355203 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
CXorf40B-201ENST00000355203 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
CXorf40B-201ENST00000355203 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
CXorf40B-201ENST00000355203 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
CXorf40B-201ENST00000355203 SOGA1O94964 1423 aa21.3■■□□□ 1
CXorf40B-201ENST00000355203 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
CXorf40B-201ENST00000355203 WDR97A6NE52 1622 aa21.29■■□□□ 1
CXorf40B-201ENST00000355203 ARHGEF11O15085 1522 aa21.28■■□□□ 1
CXorf40B-201ENST00000355203 CUX1P39880 1505 aa21.28■■□□□ 1
CXorf40B-201ENST00000355203 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
CXorf40B-201ENST00000355203 CHD1O14646 1710 aa21.24■□□□□ 0.99
CXorf40B-201ENST00000355203 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
CXorf40B-201ENST00000355203 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
CXorf40B-201ENST00000355203 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
CXorf40B-201ENST00000355203 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
CXorf40B-201ENST00000355203 FBLN2P98095 1184 aa21.13■□□□□ 0.97
CXorf40B-201ENST00000355203 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
CXorf40B-201ENST00000355203 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
CXorf40B-201ENST00000355203 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
CXorf40B-201ENST00000355203 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
CXorf40B-201ENST00000355203 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
CXorf40B-201ENST00000355203 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
CXorf40B-201ENST00000355203 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
CXorf40B-201ENST00000355203 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
CXorf40B-201ENST00000355203 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
CXorf40B-201ENST00000355203 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
CXorf40B-201ENST00000355203 PBRM1Q86U86 1689 aa21■□□□□ 0.95
CXorf40B-201ENST00000355203 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
CXorf40B-201ENST00000355203 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
CXorf40B-201ENST00000355203 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
CXorf40B-201ENST00000355203 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
CXorf40B-201ENST00000355203 ADAMTS12P58397 1594 aa20.86■□□□□ 0.93
CXorf40B-201ENST00000355203 NUP160Q12769 1436 aa20.83■□□□□ 0.93
CXorf40B-201ENST00000355203 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
CXorf40B-201ENST00000355203 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
CXorf40B-201ENST00000355203 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
CXorf40B-201ENST00000355203 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
CXorf40B-201ENST00000355203 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
CXorf40B-201ENST00000355203 ERCC6L2Q5T890 1561 aa20.71■□□□□ 0.91
CXorf40B-201ENST00000355203 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
CXorf40B-201ENST00000355203 PRG4Q92954 1404 aaPredicted RBP20.56■□□□□ 0.88
CXorf40B-201ENST00000355203 JPH4Q96JJ6 628 aa20.55■□□□□ 0.88
CXorf40B-201ENST00000355203 IGF1RP08069 1367 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms