RNA–Protein interactions for RNA: ENST00000349455.7

CD8B-202, Transcript of CD8b molecule, humanhuman

TSL 1 (best) BASIC

Gene CD8B, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD8B-202ENST00000349455 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
CD8B-202ENST00000349455 ABCC9O60706 1549 aa27.92■■■□□ 2.06
CD8B-202ENST00000349455 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
CD8B-202ENST00000349455 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
CD8B-202ENST00000349455 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
CD8B-202ENST00000349455 NACADO15069 1562 aa26.1■■□□□ 1.77
CD8B-202ENST00000349455 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
CD8B-202ENST00000349455 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.74
CD8B-202ENST00000349455 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
CD8B-202ENST00000349455 BICRAQ9NZM4 1560 aa25.72■■□□□ 1.71
CD8B-202ENST00000349455 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
CD8B-202ENST00000349455 CC2D2AQ9P2K1 1620 aa25.24■■□□□ 1.63
CD8B-202ENST00000349455 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
CD8B-202ENST00000349455 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
CD8B-202ENST00000349455 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
CD8B-202ENST00000349455 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
CD8B-202ENST00000349455 EIF4G1Q04637 1599 aaKnown RBP25.07■■□□□ 1.6
CD8B-202ENST00000349455 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
CD8B-202ENST00000349455 DNAJC5Q9H3Z4 198 aa24.74■■□□□ 1.55
CD8B-202ENST00000349455 CUX2O14529 1486 aa24.25■■□□□ 1.47
CD8B-202ENST00000349455 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
CD8B-202ENST00000349455 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
CD8B-202ENST00000349455 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
CD8B-202ENST00000349455 NESP48681 1621 aa23.89■■□□□ 1.42
CD8B-202ENST00000349455 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
CD8B-202ENST00000349455 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
CD8B-202ENST00000349455 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
CD8B-202ENST00000349455 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
CD8B-202ENST00000349455 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
CD8B-202ENST00000349455 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
CD8B-202ENST00000349455 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
CD8B-202ENST00000349455 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
CD8B-202ENST00000349455 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
CD8B-202ENST00000349455 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
CD8B-202ENST00000349455 PDS5BQ9NTI5 1447 aa23.45■■□□□ 1.34
CD8B-202ENST00000349455 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
CD8B-202ENST00000349455 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
CD8B-202ENST00000349455 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
CD8B-202ENST00000349455 WDR62O43379 1518 aa23.31■■□□□ 1.32
CD8B-202ENST00000349455 WIZO95785 1651 aa23.18■■□□□ 1.3
CD8B-202ENST00000349455 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
CD8B-202ENST00000349455 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
CD8B-202ENST00000349455 OSCARQ8IYS5 282 aa23■■□□□ 1.27
CD8B-202ENST00000349455 CFTRP13569 1480 aa22.98■■□□□ 1.27
CD8B-202ENST00000349455 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
CD8B-202ENST00000349455 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
CD8B-202ENST00000349455 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
CD8B-202ENST00000349455 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
CD8B-202ENST00000349455 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
CD8B-202ENST00000349455 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
CD8B-202ENST00000349455 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
CD8B-202ENST00000349455 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
CD8B-202ENST00000349455 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
CD8B-202ENST00000349455 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
CD8B-202ENST00000349455 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
CD8B-202ENST00000349455 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
CD8B-202ENST00000349455 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
CD8B-202ENST00000349455 CHD1O14646 1710 aa22.55■■□□□ 1.2
CD8B-202ENST00000349455 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
CD8B-202ENST00000349455 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
CD8B-202ENST00000349455 TARBP1Q13395 1621 aaKnown RBP22.48■■□□□ 1.19
CD8B-202ENST00000349455 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
CD8B-202ENST00000349455 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
CD8B-202ENST00000349455 AQRO60306 1485 aaKnown RBP eCLIP22.43■■□□□ 1.18
CD8B-202ENST00000349455 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
CD8B-202ENST00000349455 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
CD8B-202ENST00000349455 FBLN2P98095 1184 aa22.28■■□□□ 1.16
CD8B-202ENST00000349455 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
CD8B-202ENST00000349455 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
CD8B-202ENST00000349455 TDRD9Q8NDG6 1382 aaKnown RBP22.21■■□□□ 1.15
CD8B-202ENST00000349455 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
CD8B-202ENST00000349455 SOGA1O94964 1423 aa22.18■■□□□ 1.14
CD8B-202ENST00000349455 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
CD8B-202ENST00000349455 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
CD8B-202ENST00000349455 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
CD8B-202ENST00000349455 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
CD8B-202ENST00000349455 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
CD8B-202ENST00000349455 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
CD8B-202ENST00000349455 CUX1P39880 1505 aa22.06■■□□□ 1.12
CD8B-202ENST00000349455 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
CD8B-202ENST00000349455 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
CD8B-202ENST00000349455 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
CD8B-202ENST00000349455 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
CD8B-202ENST00000349455 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
CD8B-202ENST00000349455 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
CD8B-202ENST00000349455 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
CD8B-202ENST00000349455 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
CD8B-202ENST00000349455 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
CD8B-202ENST00000349455 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
CD8B-202ENST00000349455 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
CD8B-202ENST00000349455 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
CD8B-202ENST00000349455 NUP160Q12769 1436 aa21.74■■□□□ 1.07
CD8B-202ENST00000349455 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
CD8B-202ENST00000349455 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CD8B-202ENST00000349455 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
CD8B-202ENST00000349455 TOP2BQ02880 1626 aa21.58■■□□□ 1.04
CD8B-202ENST00000349455 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
CD8B-202ENST00000349455 PRG4Q92954 1404 aaPredicted RBP21.54■■□□□ 1.04
CD8B-202ENST00000349455 ABCC10Q5T3U5 1492 aa21.48■■□□□ 1.03
CD8B-202ENST00000349455 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms