RNA–Protein interactions for RNA: ENST00000346193.4

FAM47A-201, Transcript of family with sequence similarity 47 member A, humanhuman

APPRIS P2 BASIC

Gene FAM47A, Length 2,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47A-201ENST00000346193 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
FAM47A-201ENST00000346193 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
FAM47A-201ENST00000346193 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
FAM47A-201ENST00000346193 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
FAM47A-201ENST00000346193 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
FAM47A-201ENST00000346193 ABCC9O60706 1549 aa22.04■■□□□ 1.12
FAM47A-201ENST00000346193 NACADO15069 1562 aa21.99■■□□□ 1.11
FAM47A-201ENST00000346193 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.11
FAM47A-201ENST00000346193 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
FAM47A-201ENST00000346193 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
FAM47A-201ENST00000346193 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
FAM47A-201ENST00000346193 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
FAM47A-201ENST00000346193 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
FAM47A-201ENST00000346193 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.95
FAM47A-201ENST00000346193 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
FAM47A-201ENST00000346193 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
FAM47A-201ENST00000346193 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
FAM47A-201ENST00000346193 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
FAM47A-201ENST00000346193 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
FAM47A-201ENST00000346193 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
FAM47A-201ENST00000346193 WIZO95785 1651 aa20.61■□□□□ 0.89
FAM47A-201ENST00000346193 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
FAM47A-201ENST00000346193 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
FAM47A-201ENST00000346193 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
FAM47A-201ENST00000346193 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
FAM47A-201ENST00000346193 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
FAM47A-201ENST00000346193 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
FAM47A-201ENST00000346193 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
FAM47A-201ENST00000346193 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
FAM47A-201ENST00000346193 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
FAM47A-201ENST00000346193 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
FAM47A-201ENST00000346193 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
FAM47A-201ENST00000346193 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
FAM47A-201ENST00000346193 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
FAM47A-201ENST00000346193 CFTRP13569 1480 aa19.78■□□□□ 0.76
FAM47A-201ENST00000346193 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
FAM47A-201ENST00000346193 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
FAM47A-201ENST00000346193 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
FAM47A-201ENST00000346193 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
FAM47A-201ENST00000346193 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
FAM47A-201ENST00000346193 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
FAM47A-201ENST00000346193 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
FAM47A-201ENST00000346193 EEA1Q15075 1411 aa19.55■□□□□ 0.72
FAM47A-201ENST00000346193 CUX1P39880 1505 aa19.45■□□□□ 0.7
FAM47A-201ENST00000346193 FANCD2Q9BXW9 1451 aa19.43■□□□□ 0.7
FAM47A-201ENST00000346193 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
FAM47A-201ENST00000346193 NESP48681 1621 aa19.36■□□□□ 0.69
FAM47A-201ENST00000346193 SOGA1O94964 1423 aa19.35■□□□□ 0.69
FAM47A-201ENST00000346193 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
FAM47A-201ENST00000346193 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.69
FAM47A-201ENST00000346193 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
FAM47A-201ENST00000346193 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
FAM47A-201ENST00000346193 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
FAM47A-201ENST00000346193 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.67
FAM47A-201ENST00000346193 KIF21BO75037 1637 aa19.27■□□□□ 0.67
FAM47A-201ENST00000346193 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
FAM47A-201ENST00000346193 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
FAM47A-201ENST00000346193 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
FAM47A-201ENST00000346193 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
FAM47A-201ENST00000346193 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
FAM47A-201ENST00000346193 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
FAM47A-201ENST00000346193 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
FAM47A-201ENST00000346193 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
FAM47A-201ENST00000346193 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
FAM47A-201ENST00000346193 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
FAM47A-201ENST00000346193 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
FAM47A-201ENST00000346193 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
FAM47A-201ENST00000346193 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
FAM47A-201ENST00000346193 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
FAM47A-201ENST00000346193 CUX2O14529 1486 aa19.08■□□□□ 0.65
FAM47A-201ENST00000346193 WDR62O43379 1518 aa19.05■□□□□ 0.64
FAM47A-201ENST00000346193 RAPGEF2Q9Y4G8 1499 aa19■□□□□ 0.63
FAM47A-201ENST00000346193 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
FAM47A-201ENST00000346193 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
FAM47A-201ENST00000346193 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
FAM47A-201ENST00000346193 CUL7Q14999 1698 aa18.98■□□□□ 0.63
FAM47A-201ENST00000346193 IGF1RP08069 1367 aa18.98■□□□□ 0.63
FAM47A-201ENST00000346193 CEP162Q5TB80 1403 aa18.97■□□□□ 0.63
FAM47A-201ENST00000346193 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
FAM47A-201ENST00000346193 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
FAM47A-201ENST00000346193 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
FAM47A-201ENST00000346193 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
FAM47A-201ENST00000346193 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
FAM47A-201ENST00000346193 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
FAM47A-201ENST00000346193 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
FAM47A-201ENST00000346193 PBRM1Q86U86 1689 aa18.83■□□□□ 0.6
FAM47A-201ENST00000346193 CLIP1P30622 1438 aa18.82■□□□□ 0.6
FAM47A-201ENST00000346193 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
FAM47A-201ENST00000346193 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
FAM47A-201ENST00000346193 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
FAM47A-201ENST00000346193 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
FAM47A-201ENST00000346193 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
FAM47A-201ENST00000346193 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
FAM47A-201ENST00000346193 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
FAM47A-201ENST00000346193 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
FAM47A-201ENST00000346193 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
FAM47A-201ENST00000346193 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
FAM47A-201ENST00000346193 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
FAM47A-201ENST00000346193 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
FAM47A-201ENST00000346193 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms