RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
CCDC78-202ENST00000345165 CCDC180Q9P1Z9 1646 aa41.61■■■■■ 4.25
CCDC78-202ENST00000345165 ABCC9O60706 1549 aa40.55■■■■■ 4.08
CCDC78-202ENST00000345165 RB1CC1Q8TDY2 1594 aa39.15■■■■□ 3.86
CCDC78-202ENST00000345165 NACADO15069 1562 aa39.1■■■■□ 3.85
CCDC78-202ENST00000345165 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
CCDC78-202ENST00000345165 ZCCHC6Q5VYS8 1495 aaKnown RBP38.76■■■■□ 3.8
CCDC78-202ENST00000345165 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
CCDC78-202ENST00000345165 DCAF8L2P0C7V8 631 aa38.57■■■■□ 3.76
CCDC78-202ENST00000345165 UNC13AQ9UPW8 1703 aa38.23■■■■□ 3.71
CCDC78-202ENST00000345165 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
CCDC78-202ENST00000345165 SHROOM4Q9ULL8 1493 aa37.76■■■■□ 3.63
CCDC78-202ENST00000345165 PABPN1Q86U42 306 aaKnown RBP eCLIP37.74■■■■□ 3.63
CCDC78-202ENST00000345165 SCRIBQ14160 1630 aa37.69■■■■□ 3.62
CCDC78-202ENST00000345165 DNAJC5BQ9UF47 199 aa37.3■■■■□ 3.56
CCDC78-202ENST00000345165 EIF4G1Q04637 1599 aaKnown RBP36.94■■■■□ 3.5
CCDC78-202ENST00000345165 CC2D2AQ9P2K1 1620 aa36.79■■■■□ 3.48
CCDC78-202ENST00000345165 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
CCDC78-202ENST00000345165 SMARCA4P51532 1647 aa36.16■■■■□ 3.38
CCDC78-202ENST00000345165 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
CCDC78-202ENST00000345165 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
CCDC78-202ENST00000345165 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
CCDC78-202ENST00000345165 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
CCDC78-202ENST00000345165 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
CCDC78-202ENST00000345165 HMGXB3Q12766 1538 aa35.91■■■■□ 3.34
CCDC78-202ENST00000345165 MROH2BQ7Z745 1585 aa35.78■■■■□ 3.32
CCDC78-202ENST00000345165 BAZ1BQ9UIG0 1483 aaKnown RBP35.66■■■■□ 3.3
CCDC78-202ENST00000345165 WIZO95785 1651 aa35.37■■■■□ 3.25
CCDC78-202ENST00000345165 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.25
CCDC78-202ENST00000345165 LAMC3Q9Y6N6 1575 aa35.16■■■■□ 3.22
CCDC78-202ENST00000345165 TOP2AP11388 1531 aaKnown RBP35.1■■■■□ 3.21
CCDC78-202ENST00000345165 NESP48681 1621 aa35.04■■■■□ 3.2
CCDC78-202ENST00000345165 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
CCDC78-202ENST00000345165 CADPSQ9ULU8 1353 aa34.91■■■■□ 3.18
CCDC78-202ENST00000345165 CUX2O14529 1486 aa34.88■■■■□ 3.17
CCDC78-202ENST00000345165 PDS5BQ9NTI5 1447 aa34.85■■■■□ 3.17
CCDC78-202ENST00000345165 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
CCDC78-202ENST00000345165 CFTRP13569 1480 aa34.72■■■■□ 3.15
CCDC78-202ENST00000345165 THOC2Q8NI27 1593 aaKnown RBP34.72■■■■□ 3.15
CCDC78-202ENST00000345165 CCDC88BA6NC98 1476 aa34.58■■■■□ 3.13
CCDC78-202ENST00000345165 PRDM2Q13029 1718 aa34.55■■■■□ 3.12
CCDC78-202ENST00000345165 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
CCDC78-202ENST00000345165 MRC2Q9UBG0 1479 aa34.5■■■■□ 3.11
CCDC78-202ENST00000345165 CEP164Q9UPV0 1460 aa34.5■■■■□ 3.11
CCDC78-202ENST00000345165 WDR62O43379 1518 aa34.45■■■■□ 3.1
CCDC78-202ENST00000345165 URB2Q14146 1524 aaKnown RBP34.15■■■■□ 3.06
CCDC78-202ENST00000345165 ABCC8Q09428 1581 aa34.05■■■■□ 3.04
CCDC78-202ENST00000345165 SUPT5HO00267 1087 aaKnown RBP34.02■■■■□ 3.04
CCDC78-202ENST00000345165 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
CCDC78-202ENST00000345165 DNMBPQ6XZF7 1577 aa33.94■■■■□ 3.02
CCDC78-202ENST00000345165 DNAJC5Q9H3Z4 198 aa33.87■■■■□ 3.01
CCDC78-202ENST00000345165 IFT140Q96RY7 1462 aa33.81■■■■□ 3
CCDC78-202ENST00000345165 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
CCDC78-202ENST00000345165 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
CCDC78-202ENST00000345165 CUX1P39880 1505 aa33.6■■■□□ 2.97
CCDC78-202ENST00000345165 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
CCDC78-202ENST00000345165 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
CCDC78-202ENST00000345165 EIF4G3O43432 1585 aaKnown RBP33.51■■■□□ 2.96
CCDC78-202ENST00000345165 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
CCDC78-202ENST00000345165 SOGA1O94964 1423 aa33.45■■■□□ 2.94
CCDC78-202ENST00000345165 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
CCDC78-202ENST00000345165 BIVM-ERCC5R4GMW8 1640 aa33.37■■■□□ 2.93
CCDC78-202ENST00000345165 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
CCDC78-202ENST00000345165 WRNQ14191 1432 aaPredicted RBP eCLIP33.32■■■□□ 2.92
CCDC78-202ENST00000345165 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.92
CCDC78-202ENST00000345165 ABCA10Q8WWZ4 1543 aa33.25■■■□□ 2.91
CCDC78-202ENST00000345165 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
CCDC78-202ENST00000345165 SYNJ1O43426 1573 aa33.23■■■□□ 2.91
CCDC78-202ENST00000345165 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
CCDC78-202ENST00000345165 ABCA5Q8WWZ7 1642 aa33.16■■■□□ 2.9
CCDC78-202ENST00000345165 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
CCDC78-202ENST00000345165 MAGI1Q96QZ7 1491 aaPredicted RBP33.14■■■□□ 2.9
CCDC78-202ENST00000345165 CHD1O14646 1710 aa33.11■■■□□ 2.89
CCDC78-202ENST00000345165 GAPVD1Q14C86 1478 aa33.1■■■□□ 2.89
CCDC78-202ENST00000345165 PBRM1Q86U86 1689 aa33.09■■■□□ 2.89
CCDC78-202ENST00000345165 SNAPC4Q5SXM2 1469 aa33.06■■■□□ 2.88
CCDC78-202ENST00000345165 SYNJ2O15056 1496 aa32.98■■■□□ 2.87
CCDC78-202ENST00000345165 ERICH3Q5RHP9 1530 aa32.89■■■□□ 2.86
CCDC78-202ENST00000345165 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
CCDC78-202ENST00000345165 FBLN2P98095 1184 aa32.82■■■□□ 2.84
CCDC78-202ENST00000345165 CHMP7Q8WUX9 453 aaPredicted RBP32.82■■■□□ 2.84
CCDC78-202ENST00000345165 CLASP1Q7Z460 1538 aa32.81■■■□□ 2.84
CCDC78-202ENST00000345165 RIMBP3CA6NJZ7 1639 aa32.78■■■□□ 2.84
CCDC78-202ENST00000345165 RIMBP3BA6NNM3 1639 aa32.78■■■□□ 2.84
CCDC78-202ENST00000345165 RIMBP3Q9UFD9 1639 aa32.78■■■□□ 2.84
CCDC78-202ENST00000345165 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
CCDC78-202ENST00000345165 FHAD1B1AJZ9 1412 aa32.74■■■□□ 2.83
CCDC78-202ENST00000345165 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
CCDC78-202ENST00000345165 KIF27Q86VH2 1401 aa32.66■■■□□ 2.82
CCDC78-202ENST00000345165 NUP160Q12769 1436 aa32.62■■■□□ 2.81
CCDC78-202ENST00000345165 CUL7Q14999 1698 aa32.57■■■□□ 2.8
CCDC78-202ENST00000345165 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
CCDC78-202ENST00000345165 IGF1RP08069 1367 aa32.49■■■□□ 2.79
CCDC78-202ENST00000345165 ARAP1Q96P48 1450 aa32.47■■■□□ 2.79
CCDC78-202ENST00000345165 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
CCDC78-202ENST00000345165 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
CCDC78-202ENST00000345165 RUSC2Q8N2Y8 1516 aa32.36■■■□□ 2.77
CCDC78-202ENST00000345165 CARMIL1Q5VZK9 1371 aa32.3■■■□□ 2.76
CCDC78-202ENST00000345165 CYB5RLQ6IPT4 315 aa32.29■■■□□ 2.76
CCDC78-202ENST00000345165 KIAA0586Q9BVV6 1533 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms