RNA–Protein interactions for RNA: ENST00000344788.7

TFAP2B-201, Transcript of transcription factor AP-2 beta, humanhuman

TSL 3

Gene TFAP2B, Length 797 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-201ENST00000344788 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
TFAP2B-201ENST00000344788 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
TFAP2B-201ENST00000344788 ABCC9O60706 1549 aa31.22■■■□□ 2.59
TFAP2B-201ENST00000344788 RB1CC1Q8TDY2 1594 aa29.93■■■□□ 2.38
TFAP2B-201ENST00000344788 NACADO15069 1562 aa29.79■■■□□ 2.36
TFAP2B-201ENST00000344788 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
TFAP2B-201ENST00000344788 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
TFAP2B-201ENST00000344788 ZCCHC6Q5VYS8 1495 aaKnown RBP29.22■■■□□ 2.27
TFAP2B-201ENST00000344788 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
TFAP2B-201ENST00000344788 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
TFAP2B-201ENST00000344788 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
TFAP2B-201ENST00000344788 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
TFAP2B-201ENST00000344788 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
TFAP2B-201ENST00000344788 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
TFAP2B-201ENST00000344788 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
TFAP2B-201ENST00000344788 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
TFAP2B-201ENST00000344788 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
TFAP2B-201ENST00000344788 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
TFAP2B-201ENST00000344788 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
TFAP2B-201ENST00000344788 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
TFAP2B-201ENST00000344788 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
TFAP2B-201ENST00000344788 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
TFAP2B-201ENST00000344788 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
TFAP2B-201ENST00000344788 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
TFAP2B-201ENST00000344788 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
TFAP2B-201ENST00000344788 BAZ1BQ9UIG0 1483 aaKnown RBP27.14■■□□□ 1.94
TFAP2B-201ENST00000344788 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
TFAP2B-201ENST00000344788 ERCC6Q03468 1493 aa27.01■■□□□ 1.91
TFAP2B-201ENST00000344788 CUX2O14529 1486 aa26.93■■□□□ 1.9
TFAP2B-201ENST00000344788 NESP48681 1621 aa26.85■■□□□ 1.89
TFAP2B-201ENST00000344788 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
TFAP2B-201ENST00000344788 WIZO95785 1651 aa26.75■■□□□ 1.87
TFAP2B-201ENST00000344788 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
TFAP2B-201ENST00000344788 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
TFAP2B-201ENST00000344788 DNAJC5Q9H3Z4 198 aa26.62■■□□□ 1.85
TFAP2B-201ENST00000344788 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
TFAP2B-201ENST00000344788 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
TFAP2B-201ENST00000344788 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
TFAP2B-201ENST00000344788 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
TFAP2B-201ENST00000344788 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
TFAP2B-201ENST00000344788 CFTRP13569 1480 aa26.37■■□□□ 1.81
TFAP2B-201ENST00000344788 CEP164Q9UPV0 1460 aa26.35■■□□□ 1.81
TFAP2B-201ENST00000344788 WDR62O43379 1518 aa26.33■■□□□ 1.81
TFAP2B-201ENST00000344788 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
TFAP2B-201ENST00000344788 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
TFAP2B-201ENST00000344788 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
TFAP2B-201ENST00000344788 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
TFAP2B-201ENST00000344788 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
TFAP2B-201ENST00000344788 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
TFAP2B-201ENST00000344788 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
TFAP2B-201ENST00000344788 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
TFAP2B-201ENST00000344788 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
TFAP2B-201ENST00000344788 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
TFAP2B-201ENST00000344788 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
TFAP2B-201ENST00000344788 EIF4G3O43432 1585 aaKnown RBP25.58■■□□□ 1.69
TFAP2B-201ENST00000344788 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
TFAP2B-201ENST00000344788 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
TFAP2B-201ENST00000344788 SOGA1O94964 1423 aa25.48■■□□□ 1.67
TFAP2B-201ENST00000344788 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
TFAP2B-201ENST00000344788 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
TFAP2B-201ENST00000344788 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
TFAP2B-201ENST00000344788 CUX1P39880 1505 aa25.43■■□□□ 1.66
TFAP2B-201ENST00000344788 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
TFAP2B-201ENST00000344788 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
TFAP2B-201ENST00000344788 CHD1O14646 1710 aa25.34■■□□□ 1.65
TFAP2B-201ENST00000344788 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
TFAP2B-201ENST00000344788 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
TFAP2B-201ENST00000344788 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
TFAP2B-201ENST00000344788 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
TFAP2B-201ENST00000344788 FBLN2P98095 1184 aa25.27■■□□□ 1.64
TFAP2B-201ENST00000344788 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
TFAP2B-201ENST00000344788 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
TFAP2B-201ENST00000344788 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
TFAP2B-201ENST00000344788 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
TFAP2B-201ENST00000344788 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
TFAP2B-201ENST00000344788 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
TFAP2B-201ENST00000344788 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
TFAP2B-201ENST00000344788 WRNQ14191 1432 aaPredicted RBP eCLIP25.16■■□□□ 1.62
TFAP2B-201ENST00000344788 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
TFAP2B-201ENST00000344788 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
TFAP2B-201ENST00000344788 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
TFAP2B-201ENST00000344788 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
TFAP2B-201ENST00000344788 SYNJ1O43426 1573 aa25.14■■□□□ 1.61
TFAP2B-201ENST00000344788 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
TFAP2B-201ENST00000344788 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
TFAP2B-201ENST00000344788 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
TFAP2B-201ENST00000344788 ARAP1Q96P48 1450 aa25■■□□□ 1.59
TFAP2B-201ENST00000344788 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
TFAP2B-201ENST00000344788 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
TFAP2B-201ENST00000344788 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
TFAP2B-201ENST00000344788 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.58
TFAP2B-201ENST00000344788 NUP160Q12769 1436 aa24.83■■□□□ 1.57
TFAP2B-201ENST00000344788 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
TFAP2B-201ENST00000344788 TRHP20396 242 aaPredicted RBP24.7■■□□□ 1.54
TFAP2B-201ENST00000344788 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
TFAP2B-201ENST00000344788 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
TFAP2B-201ENST00000344788 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
TFAP2B-201ENST00000344788 CUL7Q14999 1698 aa24.61■■□□□ 1.53
TFAP2B-201ENST00000344788 IGF1RP08069 1367 aa24.58■■□□□ 1.53
TFAP2B-201ENST00000344788 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms