RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NISCHQ9Y2I1 1504 aa37.84■■■■□ 3.65
CEACAM1-202ENST00000344391 CCDC180Q9P1Z9 1646 aa33.19■■■□□ 2.9
CEACAM1-202ENST00000344391 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
CEACAM1-202ENST00000344391 ABCC9O60706 1549 aa31.6■■■□□ 2.65
CEACAM1-202ENST00000344391 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
CEACAM1-202ENST00000344391 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
CEACAM1-202ENST00000344391 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
CEACAM1-202ENST00000344391 NACADO15069 1562 aa30.98■■■□□ 2.55
CEACAM1-202ENST00000344391 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
CEACAM1-202ENST00000344391 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
CEACAM1-202ENST00000344391 SCRIBQ14160 1630 aa30.41■■■□□ 2.46
CEACAM1-202ENST00000344391 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
CEACAM1-202ENST00000344391 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
CEACAM1-202ENST00000344391 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
CEACAM1-202ENST00000344391 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
CEACAM1-202ENST00000344391 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
CEACAM1-202ENST00000344391 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
CEACAM1-202ENST00000344391 RSF1Q96T23 1441 aaPredicted RBP29.21■■■□□ 2.27
CEACAM1-202ENST00000344391 MROH2BQ7Z745 1585 aa29.2■■■□□ 2.27
CEACAM1-202ENST00000344391 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
CEACAM1-202ENST00000344391 EIF4G1Q04637 1599 aaKnown RBP28.98■■■□□ 2.23
CEACAM1-202ENST00000344391 WIZO95785 1651 aa28.95■■■□□ 2.23
CEACAM1-202ENST00000344391 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
CEACAM1-202ENST00000344391 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
CEACAM1-202ENST00000344391 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
CEACAM1-202ENST00000344391 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
CEACAM1-202ENST00000344391 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
CEACAM1-202ENST00000344391 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
CEACAM1-202ENST00000344391 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
CEACAM1-202ENST00000344391 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
CEACAM1-202ENST00000344391 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
CEACAM1-202ENST00000344391 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
CEACAM1-202ENST00000344391 CFTRP13569 1480 aa27.85■■■□□ 2.05
CEACAM1-202ENST00000344391 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
CEACAM1-202ENST00000344391 CADPSQ9ULU8 1353 aa27.81■■■□□ 2.04
CEACAM1-202ENST00000344391 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
CEACAM1-202ENST00000344391 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
CEACAM1-202ENST00000344391 NESP48681 1621 aa27.65■■■□□ 2.02
CEACAM1-202ENST00000344391 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
CEACAM1-202ENST00000344391 TRIM41Q8WV44 630 aa27.53■■■□□ 2
CEACAM1-202ENST00000344391 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
CEACAM1-202ENST00000344391 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
CEACAM1-202ENST00000344391 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
CEACAM1-202ENST00000344391 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
CEACAM1-202ENST00000344391 KIF21AQ7Z4S6 1674 aa27.35■■□□□ 1.97
CEACAM1-202ENST00000344391 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
CEACAM1-202ENST00000344391 TOP2BQ02880 1626 aa27.35■■□□□ 1.97
CEACAM1-202ENST00000344391 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
CEACAM1-202ENST00000344391 CUX1P39880 1505 aa27.33■■□□□ 1.97
CEACAM1-202ENST00000344391 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
CEACAM1-202ENST00000344391 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
CEACAM1-202ENST00000344391 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
CEACAM1-202ENST00000344391 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
CEACAM1-202ENST00000344391 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
CEACAM1-202ENST00000344391 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
CEACAM1-202ENST00000344391 SOGA1O94964 1423 aa27.04■■□□□ 1.92
CEACAM1-202ENST00000344391 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
CEACAM1-202ENST00000344391 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
CEACAM1-202ENST00000344391 WDR62O43379 1518 aa26.99■■□□□ 1.91
CEACAM1-202ENST00000344391 FAM9AQ8IZU1 332 aaPredicted RBP26.98■■□□□ 1.91
CEACAM1-202ENST00000344391 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
CEACAM1-202ENST00000344391 EEA1Q15075 1411 aa26.95■■□□□ 1.9
CEACAM1-202ENST00000344391 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
CEACAM1-202ENST00000344391 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
CEACAM1-202ENST00000344391 KIF27Q86VH2 1401 aa26.84■■□□□ 1.89
CEACAM1-202ENST00000344391 CUX2O14529 1486 aa26.83■■□□□ 1.89
CEACAM1-202ENST00000344391 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
CEACAM1-202ENST00000344391 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
CEACAM1-202ENST00000344391 CSRNP3Q8WYN3 585 aa26.81■■□□□ 1.88
CEACAM1-202ENST00000344391 LOC105371045A0A1W2PR82 267 aa26.74■■□□□ 1.87
CEACAM1-202ENST00000344391 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
CEACAM1-202ENST00000344391 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
CEACAM1-202ENST00000344391 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
CEACAM1-202ENST00000344391 IGF1RP08069 1367 aa26.64■■□□□ 1.85
CEACAM1-202ENST00000344391 KIF21BO75037 1637 aa26.63■■□□□ 1.85
CEACAM1-202ENST00000344391 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
CEACAM1-202ENST00000344391 PRXQ9BXM0 1461 aa26.59■■□□□ 1.85
CEACAM1-202ENST00000344391 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
CEACAM1-202ENST00000344391 EHMT2Q96KQ7 1210 aa26.57■■□□□ 1.84
CEACAM1-202ENST00000344391 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.841e-6■■□□□ 14.5
CEACAM1-202ENST00000344391 GOLGA3Q08378 1498 aa26.55■■□□□ 1.84
CEACAM1-202ENST00000344391 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
CEACAM1-202ENST00000344391 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
CEACAM1-202ENST00000344391 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
CEACAM1-202ENST00000344391 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
CEACAM1-202ENST00000344391 CARMIL1Q5VZK9 1371 aa26.49■■□□□ 1.83
CEACAM1-202ENST00000344391 CUL7Q14999 1698 aa26.49■■□□□ 1.83
CEACAM1-202ENST00000344391 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
CEACAM1-202ENST00000344391 TNIKQ9UKE5 1360 aa26.4■■□□□ 1.82
CEACAM1-202ENST00000344391 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
CEACAM1-202ENST00000344391 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
CEACAM1-202ENST00000344391 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.8
CEACAM1-202ENST00000344391 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
CEACAM1-202ENST00000344391 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
CEACAM1-202ENST00000344391 CEP162Q5TB80 1403 aa26.21■■□□□ 1.79
CEACAM1-202ENST00000344391 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
CEACAM1-202ENST00000344391 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
CEACAM1-202ENST00000344391 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
CEACAM1-202ENST00000344391 CHMP7Q8WUX9 453 aaPredicted RBP26.1■■□□□ 1.77
CEACAM1-202ENST00000344391 CLIP1P30622 1438 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms