RNA–Protein interactions for RNA: ENST00000343876.6

CCDC141-201, Transcript of coiled-coil domain containing 141, humanhuman

TSL 1 (best)

Gene CCDC141, Length 3,795 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-201ENST00000343876 NISCHQ9Y2I1 1504 aa10.95□□□□□ -0.66
CCDC141-201ENST00000343876 CCDC180Q9P1Z9 1646 aa9.97□□□□□ -0.81
CCDC141-201ENST00000343876 ABCC9O60706 1549 aa9.7□□□□□ -0.86
CCDC141-201ENST00000343876 RB1CC1Q8TDY2 1594 aa9.39□□□□□ -0.91
CCDC141-201ENST00000343876 NACADO15069 1562 aa9.36□□□□□ -0.91
CCDC141-201ENST00000343876 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
CCDC141-201ENST00000343876 UNC13AQ9UPW8 1703 aa9.21□□□□□ -0.93
CCDC141-201ENST00000343876 DCAF1Q9Y4B6 1507 aa9.17□□□□□ -0.94
CCDC141-201ENST00000343876 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
CCDC141-201ENST00000343876 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
CCDC141-201ENST00000343876 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
CCDC141-201ENST00000343876 ZCCHC6Q5VYS8 1495 aaKnown RBP9.1□□□□□ -0.95
CCDC141-201ENST00000343876 DNAJC5BQ9UF47 199 aa9.05□□□□□ -0.96
CCDC141-201ENST00000343876 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
CCDC141-201ENST00000343876 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
CCDC141-201ENST00000343876 CC2D2AQ9P2K1 1620 aa8.87□□□□□ -0.99
CCDC141-201ENST00000343876 EIF4G1Q04637 1599 aaKnown RBP8.86□□□□□ -0.99
CCDC141-201ENST00000343876 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
CCDC141-201ENST00000343876 NCAPD3P42695 1498 aa8.6□□□□□ -1.03
CCDC141-201ENST00000343876 HMGXB3Q12766 1538 aa8.59□□□□□ -1.03
CCDC141-201ENST00000343876 PEG3Q9GZU2 1588 aa8.57□□□□□ -1.04
CCDC141-201ENST00000343876 SMARCA4P51532 1647 aa8.56□□□□□ -1.04
CCDC141-201ENST00000343876 SMARCA2P51531 1590 aa8.56□□□□□ -1.04
CCDC141-201ENST00000343876 ATAD2BQ9ULI0 1458 aa8.53□□□□□ -1.04
CCDC141-201ENST00000343876 CUX2O14529 1486 aa8.53□□□□□ -1.04
CCDC141-201ENST00000343876 BAZ1AQ9NRL2 1556 aaPredicted RBP8.52□□□□□ -1.05
CCDC141-201ENST00000343876 LAMC3Q9Y6N6 1575 aa8.43□□□□□ -1.06
CCDC141-201ENST00000343876 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
CCDC141-201ENST00000343876 THOC2Q8NI27 1593 aaKnown RBP8.41□□□□□ -1.06
CCDC141-201ENST00000343876 PELP1Q8IZL8 1130 aaKnown RBP8.41□□□□□ -1.06
CCDC141-201ENST00000343876 DNAJC5Q9H3Z4 198 aa8.39□□□□□ -1.07
CCDC141-201ENST00000343876 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
CCDC141-201ENST00000343876 MROH2BQ7Z745 1585 aa8.38□□□□□ -1.07
CCDC141-201ENST00000343876 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
CCDC141-201ENST00000343876 KIF21AQ7Z4S6 1674 aa8.34□□□□□ -1.07
CCDC141-201ENST00000343876 MYT1Q01538 1121 aa8.34□□□□□ -1.07
CCDC141-201ENST00000343876 NESP48681 1621 aa8.34□□□□□ -1.07
CCDC141-201ENST00000343876 PDS5BQ9NTI5 1447 aa8.3□□□□□ -1.08
CCDC141-201ENST00000343876 WDR62O43379 1518 aa8.29□□□□□ -1.08
CCDC141-201ENST00000343876 WIZO95785 1651 aa8.29□□□□□ -1.08
CCDC141-201ENST00000343876 PRDM2Q13029 1718 aa8.28□□□□□ -1.08
CCDC141-201ENST00000343876 CADPSQ9ULU8 1353 aa8.27□□□□□ -1.09
CCDC141-201ENST00000343876 MRC2Q9UBG0 1479 aa8.26□□□□□ -1.09
CCDC141-201ENST00000343876 TOP2AP11388 1531 aaKnown RBP8.26□□□□□ -1.09
CCDC141-201ENST00000343876 CHIC1Q5VXU3 224 aa8.22□□□□□ -1.09
CCDC141-201ENST00000343876 CFTRP13569 1480 aa8.22□□□□□ -1.09
CCDC141-201ENST00000343876 CEP164Q9UPV0 1460 aa8.2□□□□□ -1.1
CCDC141-201ENST00000343876 RSF1Q96T23 1441 aaPredicted RBP8.2□□□□□ -1.1
CCDC141-201ENST00000343876 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
CCDC141-201ENST00000343876 URB2Q14146 1524 aaKnown RBP8.12□□□□□ -1.11
CCDC141-201ENST00000343876 SLC24A1O60721 1099 aa8.1□□□□□ -1.11
CCDC141-201ENST00000343876 ABCC8Q09428 1581 aa8.09□□□□□ -1.11
CCDC141-201ENST00000343876 CCDC88BA6NC98 1476 aa8.08□□□□□ -1.12
CCDC141-201ENST00000343876 IFT140Q96RY7 1462 aa8.07□□□□□ -1.12
CCDC141-201ENST00000343876 WDR97A6NE52 1622 aa8.07□□□□□ -1.12
CCDC141-201ENST00000343876 DNMBPQ6XZF7 1577 aa8.06□□□□□ -1.12
CCDC141-201ENST00000343876 TOPBP1Q92547 1522 aa8.05□□□□□ -1.12
CCDC141-201ENST00000343876 TARBP1Q13395 1621 aaKnown RBP8.03□□□□□ -1.12
CCDC141-201ENST00000343876 PRKCSHP14314 528 aaPredicted RBP8.02□□□□□ -1.13
CCDC141-201ENST00000343876 EIF4G3O43432 1585 aaKnown RBP8.01□□□□□ -1.13
CCDC141-201ENST00000343876 EHMT2Q96KQ7 1210 aa7.99□□□□□ -1.13
CCDC141-201ENST00000343876 RIMBP3CA6NJZ7 1639 aa7.98□□□□□ -1.13
CCDC141-201ENST00000343876 RIMBP3BA6NNM3 1639 aa7.98□□□□□ -1.13
CCDC141-201ENST00000343876 RIMBP3Q9UFD9 1639 aa7.98□□□□□ -1.13
CCDC141-201ENST00000343876 ZNF608Q9ULD9 1512 aaPredicted RBP7.97□□□□□ -1.13
CCDC141-201ENST00000343876 OSCARQ8IYS5 282 aa7.96□□□□□ -1.13
CCDC141-201ENST00000343876 CHD1O14646 1710 aa7.96□□□□□ -1.13
CCDC141-201ENST00000343876 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
CCDC141-201ENST00000343876 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
CCDC141-201ENST00000343876 ERICH6Q7L0X2 663 aa7.93□□□□□ -1.14
CCDC141-201ENST00000343876 ARHGEF11O15085 1522 aa7.93□□□□□ -1.14
CCDC141-201ENST00000343876 AEBP2Q6ZN18 517 aaPredicted RBP7.92□□□□□ -1.14
CCDC141-201ENST00000343876 CLASP1Q7Z460 1538 aa7.91□□□□□ -1.14
CCDC141-201ENST00000343876 CUX1P39880 1505 aa7.9□□□□□ -1.15
CCDC141-201ENST00000343876 MAGI1Q96QZ7 1491 aaPredicted RBP7.9□□□□□ -1.15
CCDC141-201ENST00000343876 PBRM1Q86U86 1689 aa7.89□□□□□ -1.15
CCDC141-201ENST00000343876 FGD5Q6ZNL6 1462 aa7.88□□□□□ -1.15
CCDC141-201ENST00000343876 ABCA5Q8WWZ7 1642 aa7.88□□□□□ -1.15
CCDC141-201ENST00000343876 BIVM-ERCC5R4GMW8 1640 aa7.87□□□□□ -1.15
CCDC141-201ENST00000343876 SYNJ1O43426 1573 aa7.87□□□□□ -1.15
CCDC141-201ENST00000343876 SOGA1O94964 1423 aa7.86□□□□□ -1.15
CCDC141-201ENST00000343876 AQRO60306 1485 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCDC141-201ENST00000343876 GRIN2BQ13224 1484 aa7.86□□□□□ -1.15
CCDC141-201ENST00000343876 ABCA10Q8WWZ4 1543 aa7.86□□□□□ -1.15
CCDC141-201ENST00000343876 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
CCDC141-201ENST00000343876 RAD54L2Q9Y4B4 1467 aa7.85□□□□□ -1.15
CCDC141-201ENST00000343876 ARAP1Q96P48 1450 aa7.84□□□□□ -1.15
CCDC141-201ENST00000343876 SYNJ2O15056 1496 aa7.84□□□□□ -1.15
CCDC141-201ENST00000343876 SNAPC4Q5SXM2 1469 aa7.84□□□□□ -1.15
CCDC141-201ENST00000343876 TOP2BQ02880 1626 aa7.82□□□□□ -1.16
CCDC141-201ENST00000343876 ADAMTS12P58397 1594 aa7.8□□□□□ -1.16
CCDC141-201ENST00000343876 FAM9AQ8IZU1 332 aaPredicted RBP7.8□□□□□ -1.16
CCDC141-201ENST00000343876 GAPVD1Q14C86 1478 aa7.8□□□□□ -1.16
CCDC141-201ENST00000343876 SHROOM2Q13796 1616 aa7.8□□□□□ -1.16
CCDC141-201ENST00000343876 TDRD9Q8NDG6 1382 aaKnown RBP7.78□□□□□ -1.16
CCDC141-201ENST00000343876 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
CCDC141-201ENST00000343876 HRCP23327 699 aa7.76□□□□□ -1.17
CCDC141-201ENST00000343876 NUP160Q12769 1436 aa7.76□□□□□ -1.17
CCDC141-201ENST00000343876 WRNQ14191 1432 aaPredicted RBP eCLIP7.75□□□□□ -1.17
CCDC141-201ENST00000343876 GRIN2AQ12879 1464 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms