RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
CLDN18-202ENST00000343735 CCDC180Q9P1Z9 1646 aa19.61■□□□□ 0.73
CLDN18-202ENST00000343735 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
CLDN18-202ENST00000343735 ABCC9O60706 1549 aa18.62■□□□□ 0.57
CLDN18-202ENST00000343735 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
CLDN18-202ENST00000343735 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
CLDN18-202ENST00000343735 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
CLDN18-202ENST00000343735 NACADO15069 1562 aa18.33■□□□□ 0.53
CLDN18-202ENST00000343735 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
CLDN18-202ENST00000343735 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
CLDN18-202ENST00000343735 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
CLDN18-202ENST00000343735 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
CLDN18-202ENST00000343735 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
CLDN18-202ENST00000343735 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
CLDN18-202ENST00000343735 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
CLDN18-202ENST00000343735 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
CLDN18-202ENST00000343735 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
CLDN18-202ENST00000343735 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
CLDN18-202ENST00000343735 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
CLDN18-202ENST00000343735 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
CLDN18-202ENST00000343735 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
CLDN18-202ENST00000343735 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.32
CLDN18-202ENST00000343735 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
CLDN18-202ENST00000343735 WIZO95785 1651 aa16.99■□□□□ 0.31
CLDN18-202ENST00000343735 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
CLDN18-202ENST00000343735 NCAPD3P42695 1498 aa16.9■□□□□ 0.3
CLDN18-202ENST00000343735 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
CLDN18-202ENST00000343735 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
CLDN18-202ENST00000343735 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
CLDN18-202ENST00000343735 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
CLDN18-202ENST00000343735 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
CLDN18-202ENST00000343735 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
CLDN18-202ENST00000343735 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
CLDN18-202ENST00000343735 CFTRP13569 1480 aa16.44■□□□□ 0.22
CLDN18-202ENST00000343735 LAMC3Q9Y6N6 1575 aa16.37■□□□□ 0.21
CLDN18-202ENST00000343735 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
CLDN18-202ENST00000343735 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
CLDN18-202ENST00000343735 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
CLDN18-202ENST00000343735 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
CLDN18-202ENST00000343735 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
CLDN18-202ENST00000343735 NESP48681 1621 aa16.24■□□□□ 0.19
CLDN18-202ENST00000343735 FANCD2Q9BXW9 1451 aa16.23■□□□□ 0.19
CLDN18-202ENST00000343735 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
CLDN18-202ENST00000343735 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
CLDN18-202ENST00000343735 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
CLDN18-202ENST00000343735 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
CLDN18-202ENST00000343735 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
CLDN18-202ENST00000343735 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
CLDN18-202ENST00000343735 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
CLDN18-202ENST00000343735 CUX1P39880 1505 aa16.07■□□□□ 0.16
CLDN18-202ENST00000343735 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
CLDN18-202ENST00000343735 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
CLDN18-202ENST00000343735 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
CLDN18-202ENST00000343735 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
CLDN18-202ENST00000343735 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
CLDN18-202ENST00000343735 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
CLDN18-202ENST00000343735 EEA1Q15075 1411 aa15.97■□□□□ 0.15
CLDN18-202ENST00000343735 FGD5Q6ZNL6 1462 aa15.96■□□□□ 0.15
CLDN18-202ENST00000343735 WDR62O43379 1518 aa15.94■□□□□ 0.14
CLDN18-202ENST00000343735 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
CLDN18-202ENST00000343735 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
CLDN18-202ENST00000343735 SOGA1O94964 1423 aa15.9■□□□□ 0.14
CLDN18-202ENST00000343735 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
CLDN18-202ENST00000343735 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
CLDN18-202ENST00000343735 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
CLDN18-202ENST00000343735 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
CLDN18-202ENST00000343735 IFT140Q96RY7 1462 aa15.83■□□□□ 0.12
CLDN18-202ENST00000343735 CUX2O14529 1486 aa15.83■□□□□ 0.12
CLDN18-202ENST00000343735 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
CLDN18-202ENST00000343735 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
CLDN18-202ENST00000343735 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
CLDN18-202ENST00000343735 TARBP1Q13395 1621 aaKnown RBP15.78■□□□□ 0.12
CLDN18-202ENST00000343735 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
CLDN18-202ENST00000343735 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
CLDN18-202ENST00000343735 IGF1RP08069 1367 aa15.71■□□□□ 0.1
CLDN18-202ENST00000343735 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.1
CLDN18-202ENST00000343735 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
CLDN18-202ENST00000343735 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
CLDN18-202ENST00000343735 KIF21BO75037 1637 aa15.69■□□□□ 0.1
CLDN18-202ENST00000343735 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
CLDN18-202ENST00000343735 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
CLDN18-202ENST00000343735 GOLGA3Q08378 1498 aa15.67■□□□□ 0.1
CLDN18-202ENST00000343735 PRXQ9BXM0 1461 aa15.66■□□□□ 0.1
CLDN18-202ENST00000343735 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
CLDN18-202ENST00000343735 CUL7Q14999 1698 aa15.65■□□□□ 0.1
CLDN18-202ENST00000343735 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
CLDN18-202ENST00000343735 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLDN18-202ENST00000343735 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
CLDN18-202ENST00000343735 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
CLDN18-202ENST00000343735 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
CLDN18-202ENST00000343735 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
CLDN18-202ENST00000343735 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
CLDN18-202ENST00000343735 TNIKQ9UKE5 1360 aa15.59■□□□□ 0.09
CLDN18-202ENST00000343735 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
CLDN18-202ENST00000343735 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
CLDN18-202ENST00000343735 ADAMTS12P58397 1594 aa15.52■□□□□ 0.08
CLDN18-202ENST00000343735 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
CLDN18-202ENST00000343735 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
CLDN18-202ENST00000343735 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
CLDN18-202ENST00000343735 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms