RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
PDCD1-202ENST00000343705 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
PDCD1-202ENST00000343705 ABCC9O60706 1549 aa26.55■■□□□ 1.84
PDCD1-202ENST00000343705 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
PDCD1-202ENST00000343705 NACADO15069 1562 aa25.46■■□□□ 1.67
PDCD1-202ENST00000343705 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
PDCD1-202ENST00000343705 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
PDCD1-202ENST00000343705 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
PDCD1-202ENST00000343705 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
PDCD1-202ENST00000343705 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
PDCD1-202ENST00000343705 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
PDCD1-202ENST00000343705 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
PDCD1-202ENST00000343705 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
PDCD1-202ENST00000343705 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
PDCD1-202ENST00000343705 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
PDCD1-202ENST00000343705 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
PDCD1-202ENST00000343705 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
PDCD1-202ENST00000343705 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
PDCD1-202ENST00000343705 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
PDCD1-202ENST00000343705 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
PDCD1-202ENST00000343705 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
PDCD1-202ENST00000343705 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
PDCD1-202ENST00000343705 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
PDCD1-202ENST00000343705 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
PDCD1-202ENST00000343705 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
PDCD1-202ENST00000343705 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
PDCD1-202ENST00000343705 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
PDCD1-202ENST00000343705 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
PDCD1-202ENST00000343705 WIZO95785 1651 aa22.95■■□□□ 1.26
PDCD1-202ENST00000343705 LAMC3Q9Y6N6 1575 aa22.91■■□□□ 1.26
PDCD1-202ENST00000343705 NESP48681 1621 aa22.87■■□□□ 1.25
PDCD1-202ENST00000343705 CUX2O14529 1486 aa22.85■■□□□ 1.25
PDCD1-202ENST00000343705 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
PDCD1-202ENST00000343705 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
PDCD1-202ENST00000343705 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
PDCD1-202ENST00000343705 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
PDCD1-202ENST00000343705 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
PDCD1-202ENST00000343705 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
PDCD1-202ENST00000343705 CFTRP13569 1480 aa22.56■■□□□ 1.2
PDCD1-202ENST00000343705 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
PDCD1-202ENST00000343705 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
PDCD1-202ENST00000343705 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
PDCD1-202ENST00000343705 WDR62O43379 1518 aa22.44■■□□□ 1.18
PDCD1-202ENST00000343705 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
PDCD1-202ENST00000343705 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
PDCD1-202ENST00000343705 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
PDCD1-202ENST00000343705 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
PDCD1-202ENST00000343705 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
PDCD1-202ENST00000343705 TOPBP1Q92547 1522 aa22.08■■□□□ 1.13
PDCD1-202ENST00000343705 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
PDCD1-202ENST00000343705 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
PDCD1-202ENST00000343705 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
PDCD1-202ENST00000343705 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
PDCD1-202ENST00000343705 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
PDCD1-202ENST00000343705 POLA1P09884 1462 aaPredicted RBP21.86■■□□□ 1.09
PDCD1-202ENST00000343705 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
PDCD1-202ENST00000343705 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
PDCD1-202ENST00000343705 SOGA1O94964 1423 aa21.8■■□□□ 1.08
PDCD1-202ENST00000343705 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
PDCD1-202ENST00000343705 CUX1P39880 1505 aa21.78■■□□□ 1.08
PDCD1-202ENST00000343705 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
PDCD1-202ENST00000343705 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDCD1-202ENST00000343705 RAD54L2Q9Y4B4 1467 aa21.73■■□□□ 1.07
PDCD1-202ENST00000343705 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
PDCD1-202ENST00000343705 CHD1O14646 1710 aa21.6■■□□□ 1.05
PDCD1-202ENST00000343705 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
PDCD1-202ENST00000343705 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.05
PDCD1-202ENST00000343705 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
PDCD1-202ENST00000343705 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
PDCD1-202ENST00000343705 TOP2BQ02880 1626 aa21.58■■□□□ 1.04
PDCD1-202ENST00000343705 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
PDCD1-202ENST00000343705 FBLN2P98095 1184 aa21.55■■□□□ 1.04
PDCD1-202ENST00000343705 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
PDCD1-202ENST00000343705 SNAPC4Q5SXM2 1469 aa21.54■■□□□ 1.04
PDCD1-202ENST00000343705 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
PDCD1-202ENST00000343705 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
PDCD1-202ENST00000343705 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
PDCD1-202ENST00000343705 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
PDCD1-202ENST00000343705 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
PDCD1-202ENST00000343705 RIMBP3CA6NJZ7 1639 aa21.48■■□□□ 1.03
PDCD1-202ENST00000343705 RIMBP3BA6NNM3 1639 aa21.48■■□□□ 1.03
PDCD1-202ENST00000343705 RIMBP3Q9UFD9 1639 aa21.48■■□□□ 1.03
PDCD1-202ENST00000343705 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
PDCD1-202ENST00000343705 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
PDCD1-202ENST00000343705 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
PDCD1-202ENST00000343705 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
PDCD1-202ENST00000343705 ADAMTS12P58397 1594 aa21.31■■□□□ 1
PDCD1-202ENST00000343705 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
PDCD1-202ENST00000343705 GRIN2AQ12879 1464 aa21.29■■□□□ 1
PDCD1-202ENST00000343705 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
PDCD1-202ENST00000343705 ARAP1Q96P48 1450 aa21.24■□□□□ 0.99
PDCD1-202ENST00000343705 NUP160Q12769 1436 aa21.21■□□□□ 0.99
PDCD1-202ENST00000343705 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
PDCD1-202ENST00000343705 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
PDCD1-202ENST00000343705 CUL7Q14999 1698 aa21.12■□□□□ 0.97
PDCD1-202ENST00000343705 IGF1RP08069 1367 aa21.1■□□□□ 0.97
PDCD1-202ENST00000343705 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
PDCD1-202ENST00000343705 JPH4Q96JJ6 628 aa21.01■□□□□ 0.95
PDCD1-202ENST00000343705 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
PDCD1-202ENST00000343705 CARMIL1Q5VZK9 1371 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms