RNA–Protein interactions for RNA: ENST00000343528.10

PDXK-203, Transcript of pyridoxal kinase, humanhuman

TSL 1 (best)

Gene PDXK, Length 1,101 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXK-203ENST00000343528 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
PDXK-203ENST00000343528 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
PDXK-203ENST00000343528 ABCC9O60706 1549 aa31.03■■■□□ 2.56
PDXK-203ENST00000343528 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
PDXK-203ENST00000343528 NACADO15069 1562 aa29.58■■■□□ 2.33
PDXK-203ENST00000343528 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
PDXK-203ENST00000343528 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
PDXK-203ENST00000343528 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
PDXK-203ENST00000343528 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
PDXK-203ENST00000343528 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
PDXK-203ENST00000343528 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.221e-5■□□□□ 8.6
PDXK-203ENST00000343528 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
PDXK-203ENST00000343528 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
PDXK-203ENST00000343528 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
PDXK-203ENST00000343528 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
PDXK-203ENST00000343528 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
PDXK-203ENST00000343528 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
PDXK-203ENST00000343528 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
PDXK-203ENST00000343528 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
PDXK-203ENST00000343528 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
PDXK-203ENST00000343528 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
PDXK-203ENST00000343528 SMARCA2P51531 1590 aa27.19■■□□□ 1.94
PDXK-203ENST00000343528 BAZ1AQ9NRL2 1556 aaPredicted RBP27.16■■□□□ 1.94
PDXK-203ENST00000343528 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
PDXK-203ENST00000343528 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
PDXK-203ENST00000343528 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
PDXK-203ENST00000343528 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
PDXK-203ENST00000343528 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
PDXK-203ENST00000343528 CUX2O14529 1486 aa26.74■■□□□ 1.87
PDXK-203ENST00000343528 NESP48681 1621 aa26.68■■□□□ 1.86
PDXK-203ENST00000343528 LAMC3Q9Y6N6 1575 aa26.64■■□□□ 1.86
PDXK-203ENST00000343528 WIZO95785 1651 aa26.57■■□□□ 1.84
PDXK-203ENST00000343528 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
PDXK-203ENST00000343528 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
PDXK-203ENST00000343528 DNAJC5Q9H3Z4 198 aa26.48■■□□□ 1.83
PDXK-203ENST00000343528 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
PDXK-203ENST00000343528 THOC2Q8NI27 1593 aaKnown RBP26.38■■□□□ 1.81
PDXK-203ENST00000343528 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
PDXK-203ENST00000343528 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
PDXK-203ENST00000343528 MRC2Q9UBG0 1479 aa26.21■■□□□ 1.79
PDXK-203ENST00000343528 CFTRP13569 1480 aa26.2■■□□□ 1.78
PDXK-203ENST00000343528 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
PDXK-203ENST00000343528 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
PDXK-203ENST00000343528 WDR62O43379 1518 aa26.13■■□□□ 1.77
PDXK-203ENST00000343528 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
PDXK-203ENST00000343528 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
PDXK-203ENST00000343528 URB2Q14146 1524 aaKnown RBP25.86■■□□□ 1.73
PDXK-203ENST00000343528 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
PDXK-203ENST00000343528 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
PDXK-203ENST00000343528 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
PDXK-203ENST00000343528 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
PDXK-203ENST00000343528 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
PDXK-203ENST00000343528 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
PDXK-203ENST00000343528 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
PDXK-203ENST00000343528 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
PDXK-203ENST00000343528 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
PDXK-203ENST00000343528 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
PDXK-203ENST00000343528 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
PDXK-203ENST00000343528 SOGA1O94964 1423 aa25.34■■□□□ 1.65
PDXK-203ENST00000343528 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.657e-7■■■■□ 22.4
PDXK-203ENST00000343528 RAD54L2Q9Y4B4 1467 aa25.28■■□□□ 1.64
PDXK-203ENST00000343528 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
PDXK-203ENST00000343528 CUX1P39880 1505 aa25.26■■□□□ 1.63
PDXK-203ENST00000343528 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
PDXK-203ENST00000343528 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
PDXK-203ENST00000343528 FBLN2P98095 1184 aa25.18■■□□□ 1.62
PDXK-203ENST00000343528 CHD1O14646 1710 aa25.15■■□□□ 1.62
PDXK-203ENST00000343528 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
PDXK-203ENST00000343528 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
PDXK-203ENST00000343528 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
PDXK-203ENST00000343528 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
PDXK-203ENST00000343528 ARHGEF11O15085 1522 aa25.09■■□□□ 1.61
PDXK-203ENST00000343528 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
PDXK-203ENST00000343528 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
PDXK-203ENST00000343528 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
PDXK-203ENST00000343528 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
PDXK-203ENST00000343528 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
PDXK-203ENST00000343528 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
PDXK-203ENST00000343528 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
PDXK-203ENST00000343528 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
PDXK-203ENST00000343528 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
PDXK-203ENST00000343528 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
PDXK-203ENST00000343528 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
PDXK-203ENST00000343528 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
PDXK-203ENST00000343528 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
PDXK-203ENST00000343528 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
PDXK-203ENST00000343528 ARAP1Q96P48 1450 aa24.83■■□□□ 1.56
PDXK-203ENST00000343528 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
PDXK-203ENST00000343528 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
PDXK-203ENST00000343528 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
PDXK-203ENST00000343528 ADAMTS12P58397 1594 aa24.72■■□□□ 1.55
PDXK-203ENST00000343528 NUP160Q12769 1436 aa24.66■■□□□ 1.54
PDXK-203ENST00000343528 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
PDXK-203ENST00000343528 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
PDXK-203ENST00000343528 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
PDXK-203ENST00000343528 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
PDXK-203ENST00000343528 IGF1RP08069 1367 aa24.47■■□□□ 1.51
PDXK-203ENST00000343528 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
PDXK-203ENST00000343528 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
PDXK-203ENST00000343528 CUL7Q14999 1698 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms