RNA–Protein interactions for RNA: ENST00000339847.9

CLEC17A-201, Transcript of C-type lectin domain containing 17A, humanhuman

TSL 1 (best)

Gene CLEC17A, Length 1,247 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC17A-201ENST00000339847 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
CLEC17A-201ENST00000339847 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.12
CLEC17A-201ENST00000339847 ABCC9O60706 1549 aa33.75■■■□□ 2.99
CLEC17A-201ENST00000339847 RB1CC1Q8TDY2 1594 aa32.53■■■□□ 2.8
CLEC17A-201ENST00000339847 NACADO15069 1562 aa32.49■■■□□ 2.79
CLEC17A-201ENST00000339847 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
CLEC17A-201ENST00000339847 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
CLEC17A-201ENST00000339847 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
CLEC17A-201ENST00000339847 DCAF1Q9Y4B6 1507 aa32.15■■■□□ 2.74
CLEC17A-201ENST00000339847 UNC13AQ9UPW8 1703 aa31.86■■■□□ 2.69
CLEC17A-201ENST00000339847 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
CLEC17A-201ENST00000339847 PABPN1Q86U42 306 aaKnown RBP eCLIP31.51■■■□□ 2.63
CLEC17A-201ENST00000339847 SCRIBQ14160 1630 aa31.43■■■□□ 2.62
CLEC17A-201ENST00000339847 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
CLEC17A-201ENST00000339847 DNAJC5BQ9UF47 199 aa31.06■■■□□ 2.56
CLEC17A-201ENST00000339847 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
CLEC17A-201ENST00000339847 CC2D2AQ9P2K1 1620 aa30.6■■■□□ 2.49
CLEC17A-201ENST00000339847 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
CLEC17A-201ENST00000339847 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
CLEC17A-201ENST00000339847 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
CLEC17A-201ENST00000339847 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
CLEC17A-201ENST00000339847 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
CLEC17A-201ENST00000339847 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
CLEC17A-201ENST00000339847 PEG3Q9GZU2 1588 aa29.87■■■□□ 2.37
CLEC17A-201ENST00000339847 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
CLEC17A-201ENST00000339847 HMGXB3Q12766 1538 aa29.83■■■□□ 2.37
CLEC17A-201ENST00000339847 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
CLEC17A-201ENST00000339847 WIZO95785 1651 aa29.56■■■□□ 2.32
CLEC17A-201ENST00000339847 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
CLEC17A-201ENST00000339847 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
CLEC17A-201ENST00000339847 NESP48681 1621 aa29.22■■■□□ 2.27
CLEC17A-201ENST00000339847 LAMC3Q9Y6N6 1575 aa29.2■■■□□ 2.26
CLEC17A-201ENST00000339847 ERCC6Q03468 1493 aa29.1■■■□□ 2.25
CLEC17A-201ENST00000339847 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
CLEC17A-201ENST00000339847 PDS5BQ9NTI5 1447 aa28.96■■■□□ 2.23
CLEC17A-201ENST00000339847 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
CLEC17A-201ENST00000339847 CUX2O14529 1486 aa28.9■■■□□ 2.22
CLEC17A-201ENST00000339847 CFTRP13569 1480 aa28.9■■■□□ 2.22
CLEC17A-201ENST00000339847 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
CLEC17A-201ENST00000339847 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
CLEC17A-201ENST00000339847 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
CLEC17A-201ENST00000339847 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
CLEC17A-201ENST00000339847 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
CLEC17A-201ENST00000339847 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
CLEC17A-201ENST00000339847 WDR62O43379 1518 aa28.61■■■□□ 2.17
CLEC17A-201ENST00000339847 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
CLEC17A-201ENST00000339847 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
CLEC17A-201ENST00000339847 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
CLEC17A-201ENST00000339847 TOPBP1Q92547 1522 aa28.26■■■□□ 2.11
CLEC17A-201ENST00000339847 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
CLEC17A-201ENST00000339847 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
CLEC17A-201ENST00000339847 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
CLEC17A-201ENST00000339847 CUX1P39880 1505 aa28.02■■■□□ 2.08
CLEC17A-201ENST00000339847 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
CLEC17A-201ENST00000339847 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
CLEC17A-201ENST00000339847 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
CLEC17A-201ENST00000339847 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
CLEC17A-201ENST00000339847 SOGA1O94964 1423 aa27.88■■■□□ 2.05
CLEC17A-201ENST00000339847 EIF4G3O43432 1585 aaKnown RBP27.87■■■□□ 2.05
CLEC17A-201ENST00000339847 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
CLEC17A-201ENST00000339847 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
CLEC17A-201ENST00000339847 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
CLEC17A-201ENST00000339847 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
CLEC17A-201ENST00000339847 TOP2BQ02880 1626 aa27.8■■■□□ 2.04
CLEC17A-201ENST00000339847 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.04
CLEC17A-201ENST00000339847 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
CLEC17A-201ENST00000339847 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
CLEC17A-201ENST00000339847 ABCA10Q8WWZ4 1543 aa27.68■■■□□ 2.02
CLEC17A-201ENST00000339847 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
CLEC17A-201ENST00000339847 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
CLEC17A-201ENST00000339847 GRIN2BQ13224 1484 aa27.58■■■□□ 2.01
CLEC17A-201ENST00000339847 GAPVD1Q14C86 1478 aa27.57■■■□□ 2
CLEC17A-201ENST00000339847 PBRM1Q86U86 1689 aa27.57■■■□□ 2
CLEC17A-201ENST00000339847 CHD1O14646 1710 aa27.57■■■□□ 2
CLEC17A-201ENST00000339847 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
CLEC17A-201ENST00000339847 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
CLEC17A-201ENST00000339847 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
CLEC17A-201ENST00000339847 FBLN2P98095 1184 aa27.4■■□□□ 1.98
CLEC17A-201ENST00000339847 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
CLEC17A-201ENST00000339847 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
CLEC17A-201ENST00000339847 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
CLEC17A-201ENST00000339847 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.95
CLEC17A-201ENST00000339847 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
CLEC17A-201ENST00000339847 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
CLEC17A-201ENST00000339847 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
CLEC17A-201ENST00000339847 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
CLEC17A-201ENST00000339847 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
CLEC17A-201ENST00000339847 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
CLEC17A-201ENST00000339847 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
CLEC17A-201ENST00000339847 IGF1RP08069 1367 aa27.14■■□□□ 1.94
CLEC17A-201ENST00000339847 NUP160Q12769 1436 aa27.14■■□□□ 1.93
CLEC17A-201ENST00000339847 CUL7Q14999 1698 aa27.11■■□□□ 1.93
CLEC17A-201ENST00000339847 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
CLEC17A-201ENST00000339847 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
CLEC17A-201ENST00000339847 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
CLEC17A-201ENST00000339847 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
CLEC17A-201ENST00000339847 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
CLEC17A-201ENST00000339847 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.9
CLEC17A-201ENST00000339847 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
CLEC17A-201ENST00000339847 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms