RNA–Protein interactions for RNA: ENST00000339642.10

ZNF254-201, Transcript of zinc finger protein 254, humanhuman

TSL 1 (best) BASIC

Gene ZNF254, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254-201ENST00000339642 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
ZNF254-201ENST00000339642 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
ZNF254-201ENST00000339642 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
ZNF254-201ENST00000339642 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
ZNF254-201ENST00000339642 POTEDQ86YR6 584 aa20.7■□□□□ 0.9
ZNF254-201ENST00000339642 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
ZNF254-201ENST00000339642 FOXD1Q16676 465 aa19.65■□□□□ 0.74
ZNF254-201ENST00000339642 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
ZNF254-201ENST00000339642 ABCC9O60706 1549 aa18.9■□□□□ 0.62
ZNF254-201ENST00000339642 MSH5O43196 834 aa18.85■□□□□ 0.61
ZNF254-201ENST00000339642 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
ZNF254-201ENST00000339642 NACADO15069 1562 aa18.13■□□□□ 0.49
ZNF254-201ENST00000339642 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
ZNF254-201ENST00000339642 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
ZNF254-201ENST00000339642 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
ZNF254-201ENST00000339642 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
ZNF254-201ENST00000339642 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
ZNF254-201ENST00000339642 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
ZNF254-201ENST00000339642 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
ZNF254-201ENST00000339642 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
ZNF254-201ENST00000339642 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
ZNF254-201ENST00000339642 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.39
ZNF254-201ENST00000339642 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
ZNF254-201ENST00000339642 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
ZNF254-201ENST00000339642 ADRA2BP18089 450 aa17.26■□□□□ 0.35
ZNF254-201ENST00000339642 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
ZNF254-201ENST00000339642 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
ZNF254-201ENST00000339642 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
ZNF254-201ENST00000339642 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
ZNF254-201ENST00000339642 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
ZNF254-201ENST00000339642 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
ZNF254-201ENST00000339642 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
ZNF254-201ENST00000339642 ATAD2BQ9ULI0 1458 aa16.72■□□□□ 0.27
ZNF254-201ENST00000339642 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
ZNF254-201ENST00000339642 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
ZNF254-201ENST00000339642 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
ZNF254-201ENST00000339642 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
ZNF254-201ENST00000339642 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
ZNF254-201ENST00000339642 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
ZNF254-201ENST00000339642 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
ZNF254-201ENST00000339642 WIZO95785 1651 aa16.38■□□□□ 0.21
ZNF254-201ENST00000339642 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
ZNF254-201ENST00000339642 NESP48681 1621 aa16.34■□□□□ 0.21
ZNF254-201ENST00000339642 LAMC3Q9Y6N6 1575 aa16.28■□□□□ 0.2
ZNF254-201ENST00000339642 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
ZNF254-201ENST00000339642 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
ZNF254-201ENST00000339642 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
ZNF254-201ENST00000339642 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
ZNF254-201ENST00000339642 CUX2O14529 1486 aa16.22■□□□□ 0.19
ZNF254-201ENST00000339642 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
ZNF254-201ENST00000339642 CFTRP13569 1480 aa16.13■□□□□ 0.17
ZNF254-201ENST00000339642 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
ZNF254-201ENST00000339642 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
ZNF254-201ENST00000339642 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
ZNF254-201ENST00000339642 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
ZNF254-201ENST00000339642 MRC2Q9UBG0 1479 aa16.01■□□□□ 0.15
ZNF254-201ENST00000339642 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
ZNF254-201ENST00000339642 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
ZNF254-201ENST00000339642 WDR62O43379 1518 aa15.97■□□□□ 0.15
ZNF254-201ENST00000339642 POTEHQ6S545 545 aa15.96■□□□□ 0.15
ZNF254-201ENST00000339642 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
ZNF254-201ENST00000339642 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
ZNF254-201ENST00000339642 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
ZNF254-201ENST00000339642 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
ZNF254-201ENST00000339642 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
ZNF254-201ENST00000339642 ABCC8Q09428 1581 aa15.77■□□□□ 0.11
ZNF254-201ENST00000339642 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
ZNF254-201ENST00000339642 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
ZNF254-201ENST00000339642 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
ZNF254-201ENST00000339642 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
ZNF254-201ENST00000339642 C1QBPQ07021 282 aaKnown RBP15.66■□□□□ 0.1
ZNF254-201ENST00000339642 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
ZNF254-201ENST00000339642 POLA1P09884 1462 aaPredicted RBP15.62■□□□□ 0.09
ZNF254-201ENST00000339642 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
ZNF254-201ENST00000339642 CUX1P39880 1505 aa15.58■□□□□ 0.09
ZNF254-201ENST00000339642 SOGA1O94964 1423 aa15.56■□□□□ 0.08
ZNF254-201ENST00000339642 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
ZNF254-201ENST00000339642 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
ZNF254-201ENST00000339642 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
ZNF254-201ENST00000339642 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
ZNF254-201ENST00000339642 EIF4G3O43432 1585 aaKnown RBP15.51■□□□□ 0.07
ZNF254-201ENST00000339642 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
ZNF254-201ENST00000339642 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
ZNF254-201ENST00000339642 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
ZNF254-201ENST00000339642 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
ZNF254-201ENST00000339642 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
ZNF254-201ENST00000339642 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
ZNF254-201ENST00000339642 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
ZNF254-201ENST00000339642 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
ZNF254-201ENST00000339642 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
ZNF254-201ENST00000339642 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
ZNF254-201ENST00000339642 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
ZNF254-201ENST00000339642 ABCA5Q8WWZ7 1642 aa15.33■□□□□ 0.04
ZNF254-201ENST00000339642 CHD1O14646 1710 aa15.31■□□□□ 0.04
ZNF254-201ENST00000339642 FBLN2P98095 1184 aa15.31■□□□□ 0.04
ZNF254-201ENST00000339642 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
ZNF254-201ENST00000339642 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
ZNF254-201ENST00000339642 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
ZNF254-201ENST00000339642 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
ZNF254-201ENST00000339642 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms