RNA–Protein interactions for RNA: ENST00000339252.7

HAVCR1-201, Transcript of hepatitis A virus cellular receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HAVCR1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAVCR1-201ENST00000339252 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
HAVCR1-201ENST00000339252 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
HAVCR1-201ENST00000339252 ABCC9O60706 1549 aa21.06■□□□□ 0.96
HAVCR1-201ENST00000339252 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
HAVCR1-201ENST00000339252 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
HAVCR1-201ENST00000339252 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
HAVCR1-201ENST00000339252 NACADO15069 1562 aa20.26■□□□□ 0.83
HAVCR1-201ENST00000339252 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
HAVCR1-201ENST00000339252 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
HAVCR1-201ENST00000339252 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
HAVCR1-201ENST00000339252 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
HAVCR1-201ENST00000339252 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
HAVCR1-201ENST00000339252 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
HAVCR1-201ENST00000339252 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
HAVCR1-201ENST00000339252 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
HAVCR1-201ENST00000339252 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
HAVCR1-201ENST00000339252 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
HAVCR1-201ENST00000339252 CECR2Q9BXF3 1484 aa18.95■□□□□ 0.62
HAVCR1-201ENST00000339252 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
HAVCR1-201ENST00000339252 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
HAVCR1-201ENST00000339252 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
HAVCR1-201ENST00000339252 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
HAVCR1-201ENST00000339252 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
HAVCR1-201ENST00000339252 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
HAVCR1-201ENST00000339252 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
HAVCR1-201ENST00000339252 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
HAVCR1-201ENST00000339252 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
HAVCR1-201ENST00000339252 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
HAVCR1-201ENST00000339252 WIZO95785 1651 aa18.6■□□□□ 0.57
HAVCR1-201ENST00000339252 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
HAVCR1-201ENST00000339252 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
HAVCR1-201ENST00000339252 NESP48681 1621 aa18.25■□□□□ 0.51
HAVCR1-201ENST00000339252 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
HAVCR1-201ENST00000339252 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
HAVCR1-201ENST00000339252 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
HAVCR1-201ENST00000339252 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
HAVCR1-201ENST00000339252 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
HAVCR1-201ENST00000339252 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
HAVCR1-201ENST00000339252 CFTRP13569 1480 aa18.06■□□□□ 0.48
HAVCR1-201ENST00000339252 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
HAVCR1-201ENST00000339252 PRDM2Q13029 1718 aa18■□□□□ 0.47
HAVCR1-201ENST00000339252 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
HAVCR1-201ENST00000339252 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
HAVCR1-201ENST00000339252 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
HAVCR1-201ENST00000339252 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
HAVCR1-201ENST00000339252 CUX2O14529 1486 aa17.88■□□□□ 0.45
HAVCR1-201ENST00000339252 WDR62O43379 1518 aa17.83■□□□□ 0.44
HAVCR1-201ENST00000339252 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
HAVCR1-201ENST00000339252 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
HAVCR1-201ENST00000339252 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
HAVCR1-201ENST00000339252 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
HAVCR1-201ENST00000339252 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
HAVCR1-201ENST00000339252 CUX1P39880 1505 aa17.61■□□□□ 0.41
HAVCR1-201ENST00000339252 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
HAVCR1-201ENST00000339252 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
HAVCR1-201ENST00000339252 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
HAVCR1-201ENST00000339252 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
HAVCR1-201ENST00000339252 SYNJ1O43426 1573 aa17.52■□□□□ 0.39
HAVCR1-201ENST00000339252 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
HAVCR1-201ENST00000339252 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
HAVCR1-201ENST00000339252 TARBP1Q13395 1621 aaKnown RBP17.49■□□□□ 0.39
HAVCR1-201ENST00000339252 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
HAVCR1-201ENST00000339252 SOGA1O94964 1423 aa17.48■□□□□ 0.39
HAVCR1-201ENST00000339252 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
HAVCR1-201ENST00000339252 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
HAVCR1-201ENST00000339252 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
HAVCR1-201ENST00000339252 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
HAVCR1-201ENST00000339252 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
HAVCR1-201ENST00000339252 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
HAVCR1-201ENST00000339252 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
HAVCR1-201ENST00000339252 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
HAVCR1-201ENST00000339252 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
HAVCR1-201ENST00000339252 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
HAVCR1-201ENST00000339252 EEA1Q15075 1411 aa17.28■□□□□ 0.36
HAVCR1-201ENST00000339252 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
HAVCR1-201ENST00000339252 GRIN2BQ13224 1484 aa17.27■□□□□ 0.35
HAVCR1-201ENST00000339252 SNAPC4Q5SXM2 1469 aa17.26■□□□□ 0.35
HAVCR1-201ENST00000339252 CHD1O14646 1710 aa17.21■□□□□ 0.35
HAVCR1-201ENST00000339252 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.34
HAVCR1-201ENST00000339252 FBLN2P98095 1184 aa17.2■□□□□ 0.34
HAVCR1-201ENST00000339252 KIF27Q86VH2 1401 aa17.17■□□□□ 0.34
HAVCR1-201ENST00000339252 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
HAVCR1-201ENST00000339252 SYNJ2O15056 1496 aa17.14■□□□□ 0.34
HAVCR1-201ENST00000339252 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
HAVCR1-201ENST00000339252 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
HAVCR1-201ENST00000339252 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
HAVCR1-201ENST00000339252 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
HAVCR1-201ENST00000339252 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
HAVCR1-201ENST00000339252 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
HAVCR1-201ENST00000339252 CUL7Q14999 1698 aa17.05■□□□□ 0.32
HAVCR1-201ENST00000339252 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
HAVCR1-201ENST00000339252 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
HAVCR1-201ENST00000339252 IGF1RP08069 1367 aa17.03■□□□□ 0.32
HAVCR1-201ENST00000339252 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
HAVCR1-201ENST00000339252 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
HAVCR1-201ENST00000339252 CLASP1Q7Z460 1538 aa16.97■□□□□ 0.31
HAVCR1-201ENST00000339252 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
HAVCR1-201ENST00000339252 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
HAVCR1-201ENST00000339252 KIF21BO75037 1637 aa16.95■□□□□ 0.3
HAVCR1-201ENST00000339252 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms