RNA–Protein interactions for RNA: ENST00000339180.8

CMTM5-201, Transcript of CKLF like MARVEL transmembrane domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene CMTM5, Length 1,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM5-201ENST00000339180 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.11
CMTM5-201ENST00000339180 CCDC180Q9P1Z9 1646 aa31.01■■■□□ 2.55
CMTM5-201ENST00000339180 ABCC9O60706 1549 aa30.81■■■□□ 2.52
CMTM5-201ENST00000339180 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
CMTM5-201ENST00000339180 NACADO15069 1562 aa29.19■■■□□ 2.26
CMTM5-201ENST00000339180 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
CMTM5-201ENST00000339180 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
CMTM5-201ENST00000339180 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
CMTM5-201ENST00000339180 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
CMTM5-201ENST00000339180 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
CMTM5-201ENST00000339180 PABPN1Q86U42 306 aaKnown RBP eCLIP28.64■■■□□ 2.18
CMTM5-201ENST00000339180 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
CMTM5-201ENST00000339180 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
CMTM5-201ENST00000339180 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
CMTM5-201ENST00000339180 SCRIBQ14160 1630 aa28.16■■■□□ 2.1
CMTM5-201ENST00000339180 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
CMTM5-201ENST00000339180 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
CMTM5-201ENST00000339180 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
CMTM5-201ENST00000339180 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
CMTM5-201ENST00000339180 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
CMTM5-201ENST00000339180 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
CMTM5-201ENST00000339180 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
CMTM5-201ENST00000339180 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
CMTM5-201ENST00000339180 BAZ1AQ9NRL2 1556 aaPredicted RBP26.73■■□□□ 1.87
CMTM5-201ENST00000339180 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
CMTM5-201ENST00000339180 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
CMTM5-201ENST00000339180 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
CMTM5-201ENST00000339180 CUX2O14529 1486 aa26.58■■□□□ 1.85
CMTM5-201ENST00000339180 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
CMTM5-201ENST00000339180 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
CMTM5-201ENST00000339180 NESP48681 1621 aa26.45■■□□□ 1.82
CMTM5-201ENST00000339180 WIZO95785 1651 aa26.34■■□□□ 1.81
CMTM5-201ENST00000339180 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
CMTM5-201ENST00000339180 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
CMTM5-201ENST00000339180 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
CMTM5-201ENST00000339180 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
CMTM5-201ENST00000339180 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
CMTM5-201ENST00000339180 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
CMTM5-201ENST00000339180 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
CMTM5-201ENST00000339180 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
CMTM5-201ENST00000339180 WDR62O43379 1518 aa25.88■■□□□ 1.73
CMTM5-201ENST00000339180 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
CMTM5-201ENST00000339180 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
CMTM5-201ENST00000339180 CFTRP13569 1480 aa25.81■■□□□ 1.72
CMTM5-201ENST00000339180 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
CMTM5-201ENST00000339180 CCDC88BA6NC98 1476 aa25.58■■□□□ 1.69
CMTM5-201ENST00000339180 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
CMTM5-201ENST00000339180 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
CMTM5-201ENST00000339180 OSCARQ8IYS5 282 aa25.33■■□□□ 1.65
CMTM5-201ENST00000339180 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
CMTM5-201ENST00000339180 TOPBP1Q92547 1522 aa25.32■■□□□ 1.64
CMTM5-201ENST00000339180 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
CMTM5-201ENST00000339180 DNMBPQ6XZF7 1577 aa25.27■■□□□ 1.64
CMTM5-201ENST00000339180 ZNF608Q9ULD9 1512 aaPredicted RBP25.24■■□□□ 1.63
CMTM5-201ENST00000339180 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
CMTM5-201ENST00000339180 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.61
CMTM5-201ENST00000339180 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
CMTM5-201ENST00000339180 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
CMTM5-201ENST00000339180 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
CMTM5-201ENST00000339180 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
CMTM5-201ENST00000339180 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.6
CMTM5-201ENST00000339180 CHD1O14646 1710 aa24.98■■□□□ 1.59
CMTM5-201ENST00000339180 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
CMTM5-201ENST00000339180 CUX1P39880 1505 aa24.97■■□□□ 1.59
CMTM5-201ENST00000339180 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
CMTM5-201ENST00000339180 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
CMTM5-201ENST00000339180 SOGA1O94964 1423 aa24.95■■□□□ 1.58
CMTM5-201ENST00000339180 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
CMTM5-201ENST00000339180 FBLN2P98095 1184 aa24.87■■□□□ 1.57
CMTM5-201ENST00000339180 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
CMTM5-201ENST00000339180 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
CMTM5-201ENST00000339180 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
CMTM5-201ENST00000339180 PBRM1Q86U86 1689 aa24.8■■□□□ 1.56
CMTM5-201ENST00000339180 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
CMTM5-201ENST00000339180 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
CMTM5-201ENST00000339180 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
CMTM5-201ENST00000339180 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
CMTM5-201ENST00000339180 CYB5RLQ6IPT4 315 aa24.72■■□□□ 1.55
CMTM5-201ENST00000339180 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
CMTM5-201ENST00000339180 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
CMTM5-201ENST00000339180 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
CMTM5-201ENST00000339180 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
CMTM5-201ENST00000339180 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
CMTM5-201ENST00000339180 SYNJ2O15056 1496 aa24.66■■□□□ 1.54
CMTM5-201ENST00000339180 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
CMTM5-201ENST00000339180 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
CMTM5-201ENST00000339180 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
CMTM5-201ENST00000339180 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
CMTM5-201ENST00000339180 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
CMTM5-201ENST00000339180 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
CMTM5-201ENST00000339180 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
CMTM5-201ENST00000339180 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
CMTM5-201ENST00000339180 CEP170Q5SW79 1584 aa24.34■■□□□ 1.49
CMTM5-201ENST00000339180 NUP160Q12769 1436 aa24.34■■□□□ 1.49
CMTM5-201ENST00000339180 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
CMTM5-201ENST00000339180 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
CMTM5-201ENST00000339180 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
CMTM5-201ENST00000339180 CUL7Q14999 1698 aa24.13■■□□□ 1.45
CMTM5-201ENST00000339180 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
CMTM5-201ENST00000339180 JPH4Q96JJ6 628 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms