RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
PACRG-201ENST00000337019 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
PACRG-201ENST00000337019 ABCC9O60706 1549 aa17.76■□□□□ 0.43
PACRG-201ENST00000337019 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
PACRG-201ENST00000337019 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
PACRG-201ENST00000337019 NACADO15069 1562 aa17.01■□□□□ 0.31
PACRG-201ENST00000337019 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
PACRG-201ENST00000337019 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
PACRG-201ENST00000337019 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
PACRG-201ENST00000337019 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
PACRG-201ENST00000337019 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
PACRG-201ENST00000337019 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
PACRG-201ENST00000337019 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
PACRG-201ENST00000337019 SHROOM4Q9ULL8 1493 aa16.39■□□□□ 0.21
PACRG-201ENST00000337019 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
PACRG-201ENST00000337019 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
PACRG-201ENST00000337019 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
PACRG-201ENST00000337019 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
PACRG-201ENST00000337019 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
PACRG-201ENST00000337019 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
PACRG-201ENST00000337019 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
PACRG-201ENST00000337019 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
PACRG-201ENST00000337019 NCAPD3P42695 1498 aa15.67■□□□□ 0.1
PACRG-201ENST00000337019 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
PACRG-201ENST00000337019 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
PACRG-201ENST00000337019 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
PACRG-201ENST00000337019 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
PACRG-201ENST00000337019 WIZO95785 1651 aa15.41■□□□□ 0.06
PACRG-201ENST00000337019 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
PACRG-201ENST00000337019 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
PACRG-201ENST00000337019 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
PACRG-201ENST00000337019 NESP48681 1621 aa15.3■□□□□ 0.04
PACRG-201ENST00000337019 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
PACRG-201ENST00000337019 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
PACRG-201ENST00000337019 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
PACRG-201ENST00000337019 CUX2O14529 1486 aa15.21■□□□□ 0.02
PACRG-201ENST00000337019 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
PACRG-201ENST00000337019 CFTRP13569 1480 aa15.11■□□□□ 0.01
PACRG-201ENST00000337019 THOC2Q8NI27 1593 aaKnown RBP15.1■□□□□ 0.01
PACRG-201ENST00000337019 CEP164Q9UPV0 1460 aa15.1■□□□□ 0.01
PACRG-201ENST00000337019 CCDC88BA6NC98 1476 aa15.08■□□□□ 0.01
PACRG-201ENST00000337019 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
PACRG-201ENST00000337019 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
PACRG-201ENST00000337019 SUPT5HO00267 1087 aaKnown RBP15.01□□□□□ -0.01
PACRG-201ENST00000337019 WDR62O43379 1518 aa14.99□□□□□ -0.01
PACRG-201ENST00000337019 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
PACRG-201ENST00000337019 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
PACRG-201ENST00000337019 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
PACRG-201ENST00000337019 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
PACRG-201ENST00000337019 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
PACRG-201ENST00000337019 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
PACRG-201ENST00000337019 IFT140Q96RY7 1462 aa14.77□□□□□ -0.05
PACRG-201ENST00000337019 POLA1P09884 1462 aaPredicted RBP14.67□□□□□ -0.06
PACRG-201ENST00000337019 CUX1P39880 1505 aa14.64□□□□□ -0.07
PACRG-201ENST00000337019 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
PACRG-201ENST00000337019 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
PACRG-201ENST00000337019 SOGA1O94964 1423 aa14.63□□□□□ -0.07
PACRG-201ENST00000337019 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
PACRG-201ENST00000337019 TARBP1Q13395 1621 aaKnown RBP14.61□□□□□ -0.07
PACRG-201ENST00000337019 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
PACRG-201ENST00000337019 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
PACRG-201ENST00000337019 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
PACRG-201ENST00000337019 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
PACRG-201ENST00000337019 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
PACRG-201ENST00000337019 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
PACRG-201ENST00000337019 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
PACRG-201ENST00000337019 BIVM-ERCC5R4GMW8 1640 aa14.5□□□□□ -0.09
PACRG-201ENST00000337019 FBLN2P98095 1184 aa14.49□□□□□ -0.09
PACRG-201ENST00000337019 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
PACRG-201ENST00000337019 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
PACRG-201ENST00000337019 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
PACRG-201ENST00000337019 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
PACRG-201ENST00000337019 AEBP2Q6ZN18 517 aaPredicted RBP14.46□□□□□ -0.09
PACRG-201ENST00000337019 GAPVD1Q14C86 1478 aa14.46□□□□□ -0.09
PACRG-201ENST00000337019 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
PACRG-201ENST00000337019 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
PACRG-201ENST00000337019 ABCA5Q8WWZ7 1642 aa14.42□□□□□ -0.1
PACRG-201ENST00000337019 CHD1O14646 1710 aa14.42□□□□□ -0.1
PACRG-201ENST00000337019 PBRM1Q86U86 1689 aa14.41□□□□□ -0.1
PACRG-201ENST00000337019 SYNJ2O15056 1496 aa14.39□□□□□ -0.11
PACRG-201ENST00000337019 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
PACRG-201ENST00000337019 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
PACRG-201ENST00000337019 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
PACRG-201ENST00000337019 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
PACRG-201ENST00000337019 FHAD1B1AJZ9 1412 aa14.3□□□□□ -0.12
PACRG-201ENST00000337019 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
PACRG-201ENST00000337019 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
PACRG-201ENST00000337019 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
PACRG-201ENST00000337019 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
PACRG-201ENST00000337019 GRIN2AQ12879 1464 aa14.28□□□□□ -0.12
PACRG-201ENST00000337019 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.13
PACRG-201ENST00000337019 NUP160Q12769 1436 aa14.2□□□□□ -0.14
PACRG-201ENST00000337019 CUL7Q14999 1698 aa14.2□□□□□ -0.14
PACRG-201ENST00000337019 CEP170Q5SW79 1584 aa14.18□□□□□ -0.14
PACRG-201ENST00000337019 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
PACRG-201ENST00000337019 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
PACRG-201ENST00000337019 IGF1RP08069 1367 aa14.17□□□□□ -0.14
PACRG-201ENST00000337019 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
PACRG-201ENST00000337019 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
PACRG-201ENST00000337019 SHROOM2Q13796 1616 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms