RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
SKAP1-201ENST00000336915 ABCC9O60706 1549 aa19.5■□□□□ 0.71
SKAP1-201ENST00000336915 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
SKAP1-201ENST00000336915 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
SKAP1-201ENST00000336915 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
SKAP1-201ENST00000336915 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
SKAP1-201ENST00000336915 NACADO15069 1562 aa18.21■□□□□ 0.51
SKAP1-201ENST00000336915 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
SKAP1-201ENST00000336915 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
SKAP1-201ENST00000336915 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
SKAP1-201ENST00000336915 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
SKAP1-201ENST00000336915 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
SKAP1-201ENST00000336915 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
SKAP1-201ENST00000336915 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
SKAP1-201ENST00000336915 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
SKAP1-201ENST00000336915 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
SKAP1-201ENST00000336915 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
SKAP1-201ENST00000336915 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.4
SKAP1-201ENST00000336915 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
SKAP1-201ENST00000336915 CUX2O14529 1486 aa16.82■□□□□ 0.28
SKAP1-201ENST00000336915 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
SKAP1-201ENST00000336915 NCAPD3P42695 1498 aa16.77■□□□□ 0.27
SKAP1-201ENST00000336915 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
SKAP1-201ENST00000336915 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
SKAP1-201ENST00000336915 NESP48681 1621 aa16.73■□□□□ 0.27
SKAP1-201ENST00000336915 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
SKAP1-201ENST00000336915 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
SKAP1-201ENST00000336915 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
SKAP1-201ENST00000336915 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
SKAP1-201ENST00000336915 BAZ1BQ9UIG0 1483 aaKnown RBP16.58■□□□□ 0.24
SKAP1-201ENST00000336915 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
SKAP1-201ENST00000336915 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
SKAP1-201ENST00000336915 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
SKAP1-201ENST00000336915 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
SKAP1-201ENST00000336915 WIZO95785 1651 aa16.36■□□□□ 0.21
SKAP1-201ENST00000336915 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
SKAP1-201ENST00000336915 WDR62O43379 1518 aa16.28■□□□□ 0.2
SKAP1-201ENST00000336915 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
SKAP1-201ENST00000336915 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
SKAP1-201ENST00000336915 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
SKAP1-201ENST00000336915 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
SKAP1-201ENST00000336915 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
SKAP1-201ENST00000336915 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
SKAP1-201ENST00000336915 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
SKAP1-201ENST00000336915 CFTRP13569 1480 aa16.04■□□□□ 0.16
SKAP1-201ENST00000336915 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
SKAP1-201ENST00000336915 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
SKAP1-201ENST00000336915 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
SKAP1-201ENST00000336915 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
SKAP1-201ENST00000336915 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
SKAP1-201ENST00000336915 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
SKAP1-201ENST00000336915 ZNF608Q9ULD9 1512 aaPredicted RBP15.9■□□□□ 0.14
SKAP1-201ENST00000336915 CHD1O14646 1710 aa15.87■□□□□ 0.13
SKAP1-201ENST00000336915 EIF4G3O43432 1585 aaKnown RBP15.86■□□□□ 0.13
SKAP1-201ENST00000336915 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
SKAP1-201ENST00000336915 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
SKAP1-201ENST00000336915 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
SKAP1-201ENST00000336915 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
SKAP1-201ENST00000336915 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
SKAP1-201ENST00000336915 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
SKAP1-201ENST00000336915 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
SKAP1-201ENST00000336915 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
SKAP1-201ENST00000336915 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
SKAP1-201ENST00000336915 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
SKAP1-201ENST00000336915 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
SKAP1-201ENST00000336915 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
SKAP1-201ENST00000336915 FBLN2P98095 1184 aa15.58■□□□□ 0.08
SKAP1-201ENST00000336915 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
SKAP1-201ENST00000336915 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
SKAP1-201ENST00000336915 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
SKAP1-201ENST00000336915 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
SKAP1-201ENST00000336915 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
SKAP1-201ENST00000336915 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
SKAP1-201ENST00000336915 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.08
SKAP1-201ENST00000336915 SOGA1O94964 1423 aa15.5■□□□□ 0.07
SKAP1-201ENST00000336915 CUX1P39880 1505 aa15.5■□□□□ 0.07
SKAP1-201ENST00000336915 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
SKAP1-201ENST00000336915 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
SKAP1-201ENST00000336915 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
SKAP1-201ENST00000336915 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
SKAP1-201ENST00000336915 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
SKAP1-201ENST00000336915 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
SKAP1-201ENST00000336915 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
SKAP1-201ENST00000336915 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
SKAP1-201ENST00000336915 ABCA10Q8WWZ4 1543 aa15.29■□□□□ 0.04
SKAP1-201ENST00000336915 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
SKAP1-201ENST00000336915 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
SKAP1-201ENST00000336915 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.04
SKAP1-201ENST00000336915 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
SKAP1-201ENST00000336915 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
SKAP1-201ENST00000336915 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
SKAP1-201ENST00000336915 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
SKAP1-201ENST00000336915 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
SKAP1-201ENST00000336915 NUP160Q12769 1436 aa15.18■□□□□ 0.02
SKAP1-201ENST00000336915 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
SKAP1-201ENST00000336915 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
SKAP1-201ENST00000336915 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
SKAP1-201ENST00000336915 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
SKAP1-201ENST00000336915 RUSC2Q8N2Y8 1516 aa15.08■□□□□ 0.01
SKAP1-201ENST00000336915 TSPOAP1O95153 1857 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms