RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

TSL 1 (best) BASIC

Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
SSX2-201ENST00000336777 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
SSX2-201ENST00000336777 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
SSX2-201ENST00000336777 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
SSX2-201ENST00000336777 ABCC9O60706 1549 aa22.62■■□□□ 1.21
SSX2-201ENST00000336777 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
SSX2-201ENST00000336777 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
SSX2-201ENST00000336777 NACADO15069 1562 aa21.53■■□□□ 1.04
SSX2-201ENST00000336777 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
SSX2-201ENST00000336777 MYO15BQ96JP2 1530 aa21.3■■□□□ 1
SSX2-201ENST00000336777 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
SSX2-201ENST00000336777 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
SSX2-201ENST00000336777 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
SSX2-201ENST00000336777 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
SSX2-201ENST00000336777 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
SSX2-201ENST00000336777 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
SSX2-201ENST00000336777 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
SSX2-201ENST00000336777 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
SSX2-201ENST00000336777 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
SSX2-201ENST00000336777 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
SSX2-201ENST00000336777 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
SSX2-201ENST00000336777 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
SSX2-201ENST00000336777 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
SSX2-201ENST00000336777 BAZ1AQ9NRL2 1556 aaPredicted RBP19.98■□□□□ 0.79
SSX2-201ENST00000336777 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
SSX2-201ENST00000336777 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
SSX2-201ENST00000336777 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
SSX2-201ENST00000336777 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
SSX2-201ENST00000336777 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
SSX2-201ENST00000336777 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
SSX2-201ENST00000336777 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
SSX2-201ENST00000336777 WIZO95785 1651 aa19.72■□□□□ 0.75
SSX2-201ENST00000336777 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
SSX2-201ENST00000336777 NESP48681 1621 aa19.56■□□□□ 0.72
SSX2-201ENST00000336777 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
SSX2-201ENST00000336777 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
SSX2-201ENST00000336777 FOXD1Q16676 465 aa19.41■□□□□ 0.7
SSX2-201ENST00000336777 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
SSX2-201ENST00000336777 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
SSX2-201ENST00000336777 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
SSX2-201ENST00000336777 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
SSX2-201ENST00000336777 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
SSX2-201ENST00000336777 CUX2O14529 1486 aa19.21■□□□□ 0.67
SSX2-201ENST00000336777 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
SSX2-201ENST00000336777 CFTRP13569 1480 aa19.17■□□□□ 0.66
SSX2-201ENST00000336777 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
SSX2-201ENST00000336777 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
SSX2-201ENST00000336777 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
SSX2-201ENST00000336777 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
SSX2-201ENST00000336777 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
SSX2-201ENST00000336777 WDR62O43379 1518 aa19.05■□□□□ 0.64
SSX2-201ENST00000336777 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
SSX2-201ENST00000336777 URB2Q14146 1524 aaKnown RBP18.98■□□□□ 0.63
SSX2-201ENST00000336777 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
SSX2-201ENST00000336777 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
SSX2-201ENST00000336777 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
SSX2-201ENST00000336777 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
SSX2-201ENST00000336777 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
SSX2-201ENST00000336777 CUX1P39880 1505 aa18.68■□□□□ 0.58
SSX2-201ENST00000336777 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
SSX2-201ENST00000336777 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
SSX2-201ENST00000336777 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
SSX2-201ENST00000336777 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
SSX2-201ENST00000336777 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
SSX2-201ENST00000336777 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
SSX2-201ENST00000336777 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
SSX2-201ENST00000336777 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.56
SSX2-201ENST00000336777 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
SSX2-201ENST00000336777 SOGA1O94964 1423 aa18.53■□□□□ 0.56
SSX2-201ENST00000336777 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
SSX2-201ENST00000336777 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
SSX2-201ENST00000336777 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
SSX2-201ENST00000336777 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
SSX2-201ENST00000336777 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
SSX2-201ENST00000336777 ADRA2BP18089 450 aa18.46■□□□□ 0.55
SSX2-201ENST00000336777 CHD1O14646 1710 aa18.44■□□□□ 0.54
SSX2-201ENST00000336777 PBRM1Q86U86 1689 aa18.42■□□□□ 0.54
SSX2-201ENST00000336777 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
SSX2-201ENST00000336777 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
SSX2-201ENST00000336777 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
SSX2-201ENST00000336777 FBLN2P98095 1184 aa18.35■□□□□ 0.53
SSX2-201ENST00000336777 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
SSX2-201ENST00000336777 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
SSX2-201ENST00000336777 OSCARQ8IYS5 282 aa18.33■□□□□ 0.53
SSX2-201ENST00000336777 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
SSX2-201ENST00000336777 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
SSX2-201ENST00000336777 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
SSX2-201ENST00000336777 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
SSX2-201ENST00000336777 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
SSX2-201ENST00000336777 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
SSX2-201ENST00000336777 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
SSX2-201ENST00000336777 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
SSX2-201ENST00000336777 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
SSX2-201ENST00000336777 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
SSX2-201ENST00000336777 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
SSX2-201ENST00000336777 GRIN2AQ12879 1464 aa18.14■□□□□ 0.5
SSX2-201ENST00000336777 PIAS4Q8N2W9 510 aaPredicted RBP18.14■□□□□ 0.49
SSX2-201ENST00000336777 CEP170Q5SW79 1584 aa18.11■□□□□ 0.49
SSX2-201ENST00000336777 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
SSX2-201ENST00000336777 KIF27Q86VH2 1401 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms