RNA–Protein interactions for RNA: ENST00000336578.5

PBLD-203, Transcript of phenazine biosynthesis like protein domain containing, humanhuman

TSL 1 (best) BASIC

Gene PBLD, Length 2,449 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBLD-203ENST00000336578 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
PBLD-203ENST00000336578 ABCC9O60706 1549 aa15.46■□□□□ 0.06
PBLD-203ENST00000336578 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
PBLD-203ENST00000336578 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
PBLD-203ENST00000336578 RB1CC1Q8TDY2 1594 aa14.67□□□□□ -0.06
PBLD-203ENST00000336578 NACADO15069 1562 aa14.56□□□□□ -0.08
PBLD-203ENST00000336578 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
PBLD-203ENST00000336578 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
PBLD-203ENST00000336578 AEBP2Q6ZN18 517 aaPredicted RBP14.46□□□□□ -0.09
PBLD-203ENST00000336578 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
PBLD-203ENST00000336578 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
PBLD-203ENST00000336578 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
PBLD-203ENST00000336578 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
PBLD-203ENST00000336578 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
PBLD-203ENST00000336578 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
PBLD-203ENST00000336578 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
PBLD-203ENST00000336578 SCRIBQ14160 1630 aa14.02□□□□□ -0.16
PBLD-203ENST00000336578 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
PBLD-203ENST00000336578 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
PBLD-203ENST00000336578 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
PBLD-203ENST00000336578 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
PBLD-203ENST00000336578 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
PBLD-203ENST00000336578 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
PBLD-203ENST00000336578 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
PBLD-203ENST00000336578 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.26
PBLD-203ENST00000336578 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
PBLD-203ENST00000336578 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
PBLD-203ENST00000336578 CUX2O14529 1486 aa13.35□□□□□ -0.27
PBLD-203ENST00000336578 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
PBLD-203ENST00000336578 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
PBLD-203ENST00000336578 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
PBLD-203ENST00000336578 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
PBLD-203ENST00000336578 BAZ1BQ9UIG0 1483 aaKnown RBP13.27□□□□□ -0.28
PBLD-203ENST00000336578 NESP48681 1621 aa13.26□□□□□ -0.29
PBLD-203ENST00000336578 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
PBLD-203ENST00000336578 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
PBLD-203ENST00000336578 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
PBLD-203ENST00000336578 LAMC3Q9Y6N6 1575 aa13.14□□□□□ -0.31
PBLD-203ENST00000336578 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
PBLD-203ENST00000336578 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.32
PBLD-203ENST00000336578 KIF21AQ7Z4S6 1674 aa13.06□□□□□ -0.32
PBLD-203ENST00000336578 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
PBLD-203ENST00000336578 WIZO95785 1651 aa13.02□□□□□ -0.33
PBLD-203ENST00000336578 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
PBLD-203ENST00000336578 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
PBLD-203ENST00000336578 WDR62O43379 1518 aa12.95□□□□□ -0.34
PBLD-203ENST00000336578 KCNA4P22459 653 aa12.92□□□□□ -0.34
PBLD-203ENST00000336578 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
PBLD-203ENST00000336578 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
PBLD-203ENST00000336578 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
PBLD-203ENST00000336578 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
PBLD-203ENST00000336578 CFTRP13569 1480 aa12.88□□□□□ -0.35
PBLD-203ENST00000336578 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
PBLD-203ENST00000336578 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
PBLD-203ENST00000336578 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
PBLD-203ENST00000336578 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
PBLD-203ENST00000336578 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
PBLD-203ENST00000336578 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
PBLD-203ENST00000336578 IFT140Q96RY7 1462 aa12.66□□□□□ -0.38
PBLD-203ENST00000336578 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
PBLD-203ENST00000336578 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
PBLD-203ENST00000336578 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
PBLD-203ENST00000336578 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
PBLD-203ENST00000336578 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
PBLD-203ENST00000336578 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
PBLD-203ENST00000336578 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
PBLD-203ENST00000336578 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
PBLD-203ENST00000336578 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
PBLD-203ENST00000336578 ARHGEF11O15085 1522 aa12.52□□□□□ -0.4
PBLD-203ENST00000336578 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.41
PBLD-203ENST00000336578 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.41
PBLD-203ENST00000336578 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
PBLD-203ENST00000336578 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
PBLD-203ENST00000336578 CHD1O14646 1710 aa12.46□□□□□ -0.41
PBLD-203ENST00000336578 FBLN2P98095 1184 aa12.45□□□□□ -0.42
PBLD-203ENST00000336578 SOGA1O94964 1423 aa12.45□□□□□ -0.42
PBLD-203ENST00000336578 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
PBLD-203ENST00000336578 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
PBLD-203ENST00000336578 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
PBLD-203ENST00000336578 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
PBLD-203ENST00000336578 CUX1P39880 1505 aa12.4□□□□□ -0.42
PBLD-203ENST00000336578 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
PBLD-203ENST00000336578 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
PBLD-203ENST00000336578 WDR97A6NE52 1622 aa12.39□□□□□ -0.43
PBLD-203ENST00000336578 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
PBLD-203ENST00000336578 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
PBLD-203ENST00000336578 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
PBLD-203ENST00000336578 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
PBLD-203ENST00000336578 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
PBLD-203ENST00000336578 SYNJ1O43426 1573 aa12.33□□□□□ -0.44
PBLD-203ENST00000336578 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
PBLD-203ENST00000336578 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
PBLD-203ENST00000336578 ADRA2BP18089 450 aa12.3□□□□□ -0.44
PBLD-203ENST00000336578 GAPVD1Q14C86 1478 aa12.29□□□□□ -0.44
PBLD-203ENST00000336578 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
PBLD-203ENST00000336578 PBRM1Q86U86 1689 aa12.27□□□□□ -0.44
PBLD-203ENST00000336578 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.44
PBLD-203ENST00000336578 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
PBLD-203ENST00000336578 PRKCSHP14314 528 aaPredicted RBP12.22□□□□□ -0.45
PBLD-203ENST00000336578 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms