RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
UBE2E2-201ENST00000335798 CCDC180Q9P1Z9 1646 aa41.37■■■■■ 4.21
UBE2E2-201ENST00000335798 ABCC9O60706 1549 aa39.83■■■■□ 3.97
UBE2E2-201ENST00000335798 ZCCHC6Q5VYS8 1495 aaKnown RBP39■■■■□ 3.83
UBE2E2-201ENST00000335798 NACADO15069 1562 aa38.69■■■■□ 3.78
UBE2E2-201ENST00000335798 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
UBE2E2-201ENST00000335798 MYO15BQ96JP2 1530 aa38.66■■■■□ 3.78
UBE2E2-201ENST00000335798 RB1CC1Q8TDY2 1594 aa38.6■■■■□ 3.77
UBE2E2-201ENST00000335798 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
UBE2E2-201ENST00000335798 UNC13AQ9UPW8 1703 aa37.92■■■■□ 3.66
UBE2E2-201ENST00000335798 SCRIBQ14160 1630 aa37.7■■■■□ 3.63
UBE2E2-201ENST00000335798 BICRAQ9NZM4 1560 aa37.5■■■■□ 3.59
UBE2E2-201ENST00000335798 PABPN1Q86U42 306 aaKnown RBP eCLIP37.22■■■■□ 3.55
UBE2E2-201ENST00000335798 SHROOM4Q9ULL8 1493 aa37.09■■■■□ 3.53
UBE2E2-201ENST00000335798 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
UBE2E2-201ENST00000335798 CECR2Q9BXF3 1484 aa36.28■■■■□ 3.4
UBE2E2-201ENST00000335798 SMARCA4P51532 1647 aa36.15■■■■□ 3.38
UBE2E2-201ENST00000335798 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
UBE2E2-201ENST00000335798 BAZ1AQ9NRL2 1556 aaPredicted RBP36.13■■■■□ 3.37
UBE2E2-201ENST00000335798 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
UBE2E2-201ENST00000335798 MROH2BQ7Z745 1585 aa35.97■■■■□ 3.35
UBE2E2-201ENST00000335798 PEG3Q9GZU2 1588 aa35.82■■■■□ 3.32
UBE2E2-201ENST00000335798 ATAD2BQ9ULI0 1458 aa35.76■■■■□ 3.31
UBE2E2-201ENST00000335798 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
UBE2E2-201ENST00000335798 RSF1Q96T23 1441 aaPredicted RBP35.7■■■■□ 3.3
UBE2E2-201ENST00000335798 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
UBE2E2-201ENST00000335798 WIZO95785 1651 aa35.66■■■■□ 3.3
UBE2E2-201ENST00000335798 HMGXB3Q12766 1538 aa35.59■■■■□ 3.29
UBE2E2-201ENST00000335798 BAZ1BQ9UIG0 1483 aaKnown RBP35.46■■■■□ 3.27
UBE2E2-201ENST00000335798 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
UBE2E2-201ENST00000335798 SUPT5HO00267 1087 aaKnown RBP35■■■■□ 3.19
UBE2E2-201ENST00000335798 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
UBE2E2-201ENST00000335798 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
UBE2E2-201ENST00000335798 NESP48681 1621 aa34.66■■■■□ 3.14
UBE2E2-201ENST00000335798 CADPSQ9ULU8 1353 aa34.59■■■■□ 3.13
UBE2E2-201ENST00000335798 CFTRP13569 1480 aa34.56■■■■□ 3.12
UBE2E2-201ENST00000335798 PRDM2Q13029 1718 aa34.52■■■■□ 3.12
UBE2E2-201ENST00000335798 KIF21AQ7Z4S6 1674 aa34.37■■■■□ 3.09
UBE2E2-201ENST00000335798 PDS5BQ9NTI5 1447 aa34.32■■■■□ 3.08
UBE2E2-201ENST00000335798 ERCC6Q03468 1493 aa34.24■■■■□ 3.07
UBE2E2-201ENST00000335798 FANCD2Q9BXW9 1451 aa34.23■■■■□ 3.07
UBE2E2-201ENST00000335798 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
UBE2E2-201ENST00000335798 THOC2Q8NI27 1593 aaKnown RBP34.13■■■■□ 3.05
UBE2E2-201ENST00000335798 MRC2Q9UBG0 1479 aa34■■■■□ 3.03
UBE2E2-201ENST00000335798 WDR62O43379 1518 aa33.94■■■■□ 3.02
UBE2E2-201ENST00000335798 URB2Q14146 1524 aaKnown RBP33.9■■■■□ 3.02
UBE2E2-201ENST00000335798 DNMBPQ6XZF7 1577 aa33.8■■■■□ 3
UBE2E2-201ENST00000335798 CUX2O14529 1486 aa33.79■■■■□ 3
UBE2E2-201ENST00000335798 TOPBP1Q92547 1522 aa33.77■■■■□ 3
UBE2E2-201ENST00000335798 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
UBE2E2-201ENST00000335798 CUX1P39880 1505 aa33.73■■■□□ 2.99
UBE2E2-201ENST00000335798 BIVM-ERCC5R4GMW8 1640 aa33.63■■■□□ 2.97
UBE2E2-201ENST00000335798 SYNJ1O43426 1573 aa33.61■■■□□ 2.97
UBE2E2-201ENST00000335798 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
UBE2E2-201ENST00000335798 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
UBE2E2-201ENST00000335798 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
UBE2E2-201ENST00000335798 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
UBE2E2-201ENST00000335798 TARBP1Q13395 1621 aaKnown RBP33.44■■■□□ 2.94
UBE2E2-201ENST00000335798 IFT140Q96RY7 1462 aa33.4■■■□□ 2.94
UBE2E2-201ENST00000335798 WDR97A6NE52 1622 aa33.36■■■□□ 2.93
UBE2E2-201ENST00000335798 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
UBE2E2-201ENST00000335798 SOGA1O94964 1423 aa33.31■■■□□ 2.92
UBE2E2-201ENST00000335798 ZNF608Q9ULD9 1512 aaPredicted RBP33.23■■■□□ 2.91
UBE2E2-201ENST00000335798 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
UBE2E2-201ENST00000335798 EIF4G3O43432 1585 aaKnown RBP33.19■■■□□ 2.9
UBE2E2-201ENST00000335798 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
UBE2E2-201ENST00000335798 AQRO60306 1485 aaKnown RBP eCLIP33.06■■■□□ 2.88
UBE2E2-201ENST00000335798 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
UBE2E2-201ENST00000335798 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
UBE2E2-201ENST00000335798 CHIC1Q5VXU3 224 aa33.02■■■□□ 2.88
UBE2E2-201ENST00000335798 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
UBE2E2-201ENST00000335798 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
UBE2E2-201ENST00000335798 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
UBE2E2-201ENST00000335798 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
UBE2E2-201ENST00000335798 ERICH3Q5RHP9 1530 aa32.83■■■□□ 2.85
UBE2E2-201ENST00000335798 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
UBE2E2-201ENST00000335798 MAGI1Q96QZ7 1491 aaPredicted RBP32.79■■■□□ 2.84
UBE2E2-201ENST00000335798 RUSC2Q8N2Y8 1516 aa32.78■■■□□ 2.84
UBE2E2-201ENST00000335798 ADAMTS12P58397 1594 aa32.73■■■□□ 2.83
UBE2E2-201ENST00000335798 CHD1O14646 1710 aa32.72■■■□□ 2.83
UBE2E2-201ENST00000335798 CUL7Q14999 1698 aa32.67■■■□□ 2.82
UBE2E2-201ENST00000335798 IGF1RP08069 1367 aa32.67■■■□□ 2.82
UBE2E2-201ENST00000335798 SYNJ2O15056 1496 aa32.64■■■□□ 2.82
UBE2E2-201ENST00000335798 FHAD1B1AJZ9 1412 aa32.6■■■□□ 2.81
UBE2E2-201ENST00000335798 EEA1Q15075 1411 aa32.57■■■□□ 2.8
UBE2E2-201ENST00000335798 GRIN2AQ12879 1464 aa32.51■■■□□ 2.79
UBE2E2-201ENST00000335798 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
UBE2E2-201ENST00000335798 CHMP7Q8WUX9 453 aaPredicted RBP32.45■■■□□ 2.78
UBE2E2-201ENST00000335798 FBLN2P98095 1184 aa32.42■■■□□ 2.78
UBE2E2-201ENST00000335798 PRXQ9BXM0 1461 aa32.41■■■□□ 2.78
UBE2E2-201ENST00000335798 CEP170Q5SW79 1584 aa32.38■■■□□ 2.77
UBE2E2-201ENST00000335798 CSRNP3Q8WYN3 585 aa32.38■■■□□ 2.77
UBE2E2-201ENST00000335798 RAPGEF2Q9Y4G8 1499 aa32.36■■■□□ 2.77
UBE2E2-201ENST00000335798 NUP160Q12769 1436 aa32.36■■■□□ 2.77
UBE2E2-201ENST00000335798 OSCARQ8IYS5 282 aa32.35■■■□□ 2.77
UBE2E2-201ENST00000335798 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
UBE2E2-201ENST00000335798 FAM9AQ8IZU1 332 aaPredicted RBP32.32■■■□□ 2.76
UBE2E2-201ENST00000335798 KIF21BO75037 1637 aa32.3■■■□□ 2.76
UBE2E2-201ENST00000335798 CTTNBP2Q8WZ74 1663 aa32.18■■■□□ 2.74
UBE2E2-201ENST00000335798 SHROOM2Q13796 1616 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms