RNA–Protein interactions for RNA: ENST00000331103.5

TRIOBP-201, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 3

Gene TRIOBP, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-201ENST00000331103 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
TRIOBP-201ENST00000331103 ABCC9O60706 1549 aa30.78■■■□□ 2.52
TRIOBP-201ENST00000331103 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
TRIOBP-201ENST00000331103 DNAJC5BQ9UF47 199 aa29.65■■■□□ 2.34
TRIOBP-201ENST00000331103 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
TRIOBP-201ENST00000331103 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
TRIOBP-201ENST00000331103 NACADO15069 1562 aa28.41■■■□□ 2.14
TRIOBP-201ENST00000331103 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
TRIOBP-201ENST00000331103 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
TRIOBP-201ENST00000331103 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
TRIOBP-201ENST00000331103 CECR2Q9BXF3 1484 aa27.77■■■□□ 2.04
TRIOBP-201ENST00000331103 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
TRIOBP-201ENST00000331103 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.02
TRIOBP-201ENST00000331103 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
TRIOBP-201ENST00000331103 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
TRIOBP-201ENST00000331103 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
TRIOBP-201ENST00000331103 SCRIBQ14160 1630 aa27.27■■□□□ 1.96
TRIOBP-201ENST00000331103 ZCCHC6Q5VYS8 1495 aaKnown RBP27.15■■□□□ 1.94
TRIOBP-201ENST00000331103 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
TRIOBP-201ENST00000331103 CUX2O14529 1486 aa26.73■■□□□ 1.87
TRIOBP-201ENST00000331103 ERCC6Q03468 1493 aa26.6■■□□□ 1.85
TRIOBP-201ENST00000331103 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
TRIOBP-201ENST00000331103 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
TRIOBP-201ENST00000331103 NESP48681 1621 aa26.23■■□□□ 1.79
TRIOBP-201ENST00000331103 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
TRIOBP-201ENST00000331103 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
TRIOBP-201ENST00000331103 HMGXB3Q12766 1538 aa25.97■■□□□ 1.75
TRIOBP-201ENST00000331103 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
TRIOBP-201ENST00000331103 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
TRIOBP-201ENST00000331103 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
TRIOBP-201ENST00000331103 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
TRIOBP-201ENST00000331103 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
TRIOBP-201ENST00000331103 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
TRIOBP-201ENST00000331103 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
TRIOBP-201ENST00000331103 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
TRIOBP-201ENST00000331103 MRC2Q9UBG0 1479 aa25.54■■□□□ 1.68
TRIOBP-201ENST00000331103 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
TRIOBP-201ENST00000331103 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
TRIOBP-201ENST00000331103 WDR62O43379 1518 aa25.47■■□□□ 1.67
TRIOBP-201ENST00000331103 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
TRIOBP-201ENST00000331103 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
TRIOBP-201ENST00000331103 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
TRIOBP-201ENST00000331103 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
TRIOBP-201ENST00000331103 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
TRIOBP-201ENST00000331103 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
TRIOBP-201ENST00000331103 WIZO95785 1651 aa25.07■■□□□ 1.6
TRIOBP-201ENST00000331103 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
TRIOBP-201ENST00000331103 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
TRIOBP-201ENST00000331103 CFTRP13569 1480 aa25.01■■□□□ 1.59
TRIOBP-201ENST00000331103 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
TRIOBP-201ENST00000331103 TRHP20396 242 aaPredicted RBP24.99■■□□□ 1.59
TRIOBP-201ENST00000331103 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
TRIOBP-201ENST00000331103 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
TRIOBP-201ENST00000331103 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
TRIOBP-201ENST00000331103 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
TRIOBP-201ENST00000331103 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
TRIOBP-201ENST00000331103 FBLN2P98095 1184 aa24.66■■□□□ 1.54
TRIOBP-201ENST00000331103 EIF4G3O43432 1585 aaKnown RBP24.65■■□□□ 1.54
TRIOBP-201ENST00000331103 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
TRIOBP-201ENST00000331103 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
TRIOBP-201ENST00000331103 AQRO60306 1485 aaKnown RBP eCLIP24.61■■□□□ 1.53
TRIOBP-201ENST00000331103 CHD1O14646 1710 aa24.58■■□□□ 1.52
TRIOBP-201ENST00000331103 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
TRIOBP-201ENST00000331103 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
TRIOBP-201ENST00000331103 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
TRIOBP-201ENST00000331103 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
TRIOBP-201ENST00000331103 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
TRIOBP-201ENST00000331103 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
TRIOBP-201ENST00000331103 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
TRIOBP-201ENST00000331103 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
TRIOBP-201ENST00000331103 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
TRIOBP-201ENST00000331103 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
TRIOBP-201ENST00000331103 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
TRIOBP-201ENST00000331103 SOGA1O94964 1423 aa24.25■■□□□ 1.47
TRIOBP-201ENST00000331103 SYNJ1O43426 1573 aa24.2■■□□□ 1.47
TRIOBP-201ENST00000331103 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
TRIOBP-201ENST00000331103 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
TRIOBP-201ENST00000331103 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
TRIOBP-201ENST00000331103 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
TRIOBP-201ENST00000331103 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
TRIOBP-201ENST00000331103 WDR97A6NE52 1622 aa24.01■■□□□ 1.43
TRIOBP-201ENST00000331103 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
TRIOBP-201ENST00000331103 CUX1P39880 1505 aa23.94■■□□□ 1.42
TRIOBP-201ENST00000331103 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
TRIOBP-201ENST00000331103 ILDR1Q86SU0 546 aaPredicted RBP23.84■■□□□ 1.41
TRIOBP-201ENST00000331103 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
TRIOBP-201ENST00000331103 GRIN2AQ12879 1464 aa23.77■■□□□ 1.4
TRIOBP-201ENST00000331103 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
TRIOBP-201ENST00000331103 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
TRIOBP-201ENST00000331103 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
TRIOBP-201ENST00000331103 KDM4FA0A1W2PPD8 638 aa23.73■■□□□ 1.39
TRIOBP-201ENST00000331103 NUP160Q12769 1436 aa23.72■■□□□ 1.39
TRIOBP-201ENST00000331103 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
TRIOBP-201ENST00000331103 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
TRIOBP-201ENST00000331103 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
TRIOBP-201ENST00000331103 PRG4Q92954 1404 aaPredicted RBP23.61■■□□□ 1.37
TRIOBP-201ENST00000331103 ABCC10Q5T3U5 1492 aa23.6■■□□□ 1.37
TRIOBP-201ENST00000331103 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
TRIOBP-201ENST00000331103 NPM1P06748 294 aaKnown RBP eCLIP23.55■■□□□ 1.36
TRIOBP-201ENST00000331103 JPH4Q96JJ6 628 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms