RNA–Protein interactions for RNA: ENST00000330298.6

CTNNA3-201, Transcript of catenin alpha 3, humanhuman

TSL 2

Gene CTNNA3, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-201ENST00000330298 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
CTNNA3-201ENST00000330298 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
CTNNA3-201ENST00000330298 ABCC9O60706 1549 aa29.06■■■□□ 2.24
CTNNA3-201ENST00000330298 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
CTNNA3-201ENST00000330298 NACADO15069 1562 aa27.72■■■□□ 2.03
CTNNA3-201ENST00000330298 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
CTNNA3-201ENST00000330298 MYO15BQ96JP2 1530 aa27.47■■□□□ 1.99
CTNNA3-201ENST00000330298 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
CTNNA3-201ENST00000330298 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
CTNNA3-201ENST00000330298 UNC13AQ9UPW8 1703 aa27.12■■□□□ 1.93
CTNNA3-201ENST00000330298 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
CTNNA3-201ENST00000330298 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
CTNNA3-201ENST00000330298 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
CTNNA3-201ENST00000330298 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
CTNNA3-201ENST00000330298 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
CTNNA3-201ENST00000330298 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
CTNNA3-201ENST00000330298 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
CTNNA3-201ENST00000330298 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
CTNNA3-201ENST00000330298 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
CTNNA3-201ENST00000330298 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
CTNNA3-201ENST00000330298 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
CTNNA3-201ENST00000330298 SMARCA2P51531 1590 aa25.47■■□□□ 1.67
CTNNA3-201ENST00000330298 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
CTNNA3-201ENST00000330298 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
CTNNA3-201ENST00000330298 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
CTNNA3-201ENST00000330298 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
CTNNA3-201ENST00000330298 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
CTNNA3-201ENST00000330298 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
CTNNA3-201ENST00000330298 CUX2O14529 1486 aa25.06■■□□□ 1.6
CTNNA3-201ENST00000330298 NESP48681 1621 aa25.02■■□□□ 1.6
CTNNA3-201ENST00000330298 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
CTNNA3-201ENST00000330298 WIZO95785 1651 aa24.91■■□□□ 1.58
CTNNA3-201ENST00000330298 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
CTNNA3-201ENST00000330298 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
CTNNA3-201ENST00000330298 RSF1Q96T23 1441 aaPredicted RBP24.81■■□□□ 1.56
CTNNA3-201ENST00000330298 DNAJC5Q9H3Z4 198 aa24.79■■□□□ 1.56
CTNNA3-201ENST00000330298 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
CTNNA3-201ENST00000330298 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
CTNNA3-201ENST00000330298 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
CTNNA3-201ENST00000330298 CFTRP13569 1480 aa24.58■■□□□ 1.52
CTNNA3-201ENST00000330298 MRC2Q9UBG0 1479 aa24.57■■□□□ 1.52
CTNNA3-201ENST00000330298 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
CTNNA3-201ENST00000330298 WDR62O43379 1518 aa24.51■■□□□ 1.51
CTNNA3-201ENST00000330298 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
CTNNA3-201ENST00000330298 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
CTNNA3-201ENST00000330298 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
CTNNA3-201ENST00000330298 URB2Q14146 1524 aaKnown RBP24.26■■□□□ 1.47
CTNNA3-201ENST00000330298 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
CTNNA3-201ENST00000330298 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
CTNNA3-201ENST00000330298 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
CTNNA3-201ENST00000330298 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
CTNNA3-201ENST00000330298 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
CTNNA3-201ENST00000330298 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
CTNNA3-201ENST00000330298 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
CTNNA3-201ENST00000330298 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
CTNNA3-201ENST00000330298 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
CTNNA3-201ENST00000330298 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
CTNNA3-201ENST00000330298 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.39
CTNNA3-201ENST00000330298 SOGA1O94964 1423 aa23.73■■□□□ 1.39
CTNNA3-201ENST00000330298 CUX1P39880 1505 aa23.7■■□□□ 1.38
CTNNA3-201ENST00000330298 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
CTNNA3-201ENST00000330298 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
CTNNA3-201ENST00000330298 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
CTNNA3-201ENST00000330298 WDR97A6NE52 1622 aa23.67■■□□□ 1.38
CTNNA3-201ENST00000330298 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
CTNNA3-201ENST00000330298 CHD1O14646 1710 aa23.55■■□□□ 1.36
CTNNA3-201ENST00000330298 RIMBP3CA6NJZ7 1639 aa23.54■■□□□ 1.36
CTNNA3-201ENST00000330298 RIMBP3BA6NNM3 1639 aa23.54■■□□□ 1.36
CTNNA3-201ENST00000330298 RIMBP3Q9UFD9 1639 aa23.54■■□□□ 1.36
CTNNA3-201ENST00000330298 FBLN2P98095 1184 aa23.52■■□□□ 1.36
CTNNA3-201ENST00000330298 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
CTNNA3-201ENST00000330298 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
CTNNA3-201ENST00000330298 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
CTNNA3-201ENST00000330298 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
CTNNA3-201ENST00000330298 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
CTNNA3-201ENST00000330298 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
CTNNA3-201ENST00000330298 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
CTNNA3-201ENST00000330298 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
CTNNA3-201ENST00000330298 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
CTNNA3-201ENST00000330298 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
CTNNA3-201ENST00000330298 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
CTNNA3-201ENST00000330298 BIVM-ERCC5R4GMW8 1640 aa23.39■■□□□ 1.33
CTNNA3-201ENST00000330298 PBRM1Q86U86 1689 aa23.37■■□□□ 1.33
CTNNA3-201ENST00000330298 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
CTNNA3-201ENST00000330298 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
CTNNA3-201ENST00000330298 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
CTNNA3-201ENST00000330298 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
CTNNA3-201ENST00000330298 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
CTNNA3-201ENST00000330298 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
CTNNA3-201ENST00000330298 GRIN2AQ12879 1464 aa23.19■■□□□ 1.3
CTNNA3-201ENST00000330298 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
CTNNA3-201ENST00000330298 NUP160Q12769 1436 aa23.13■■□□□ 1.29
CTNNA3-201ENST00000330298 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
CTNNA3-201ENST00000330298 SHROOM2Q13796 1616 aa22.99■■□□□ 1.27
CTNNA3-201ENST00000330298 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
CTNNA3-201ENST00000330298 TRHP20396 242 aaPredicted RBP22.96■■□□□ 1.27
CTNNA3-201ENST00000330298 IGF1RP08069 1367 aa22.94■■□□□ 1.26
CTNNA3-201ENST00000330298 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
CTNNA3-201ENST00000330298 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
CTNNA3-201ENST00000330298 CUL7Q14999 1698 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms