RNA–Protein interactions for RNA: ENST00000330168.9

AC004997.1-201, humanhuman

TSL 2

Gene AC004997.1, Length 1,974 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004997.1-201ENST00000330168 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
AC004997.1-201ENST00000330168 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
AC004997.1-201ENST00000330168 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.98
AC004997.1-201ENST00000330168 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
AC004997.1-201ENST00000330168 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
AC004997.1-201ENST00000330168 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
AC004997.1-201ENST00000330168 ABCC9O60706 1549 aa26.78■■□□□ 1.88
AC004997.1-201ENST00000330168 MYO15BQ96JP2 1530 aa26.52■■□□□ 1.84
AC004997.1-201ENST00000330168 NACADO15069 1562 aa26.35■■□□□ 1.81
AC004997.1-201ENST00000330168 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
AC004997.1-201ENST00000330168 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
AC004997.1-201ENST00000330168 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
AC004997.1-201ENST00000330168 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
AC004997.1-201ENST00000330168 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
AC004997.1-201ENST00000330168 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
AC004997.1-201ENST00000330168 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
AC004997.1-201ENST00000330168 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
AC004997.1-201ENST00000330168 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
AC004997.1-201ENST00000330168 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
AC004997.1-201ENST00000330168 WIZO95785 1651 aa25.07■■□□□ 1.6
AC004997.1-201ENST00000330168 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
AC004997.1-201ENST00000330168 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
AC004997.1-201ENST00000330168 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
AC004997.1-201ENST00000330168 PEG3Q9GZU2 1588 aa24.7■■□□□ 1.54
AC004997.1-201ENST00000330168 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
AC004997.1-201ENST00000330168 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
AC004997.1-201ENST00000330168 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
AC004997.1-201ENST00000330168 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
AC004997.1-201ENST00000330168 BAZ1BQ9UIG0 1483 aaKnown RBP24.49■■□□□ 1.51
AC004997.1-201ENST00000330168 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
AC004997.1-201ENST00000330168 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
AC004997.1-201ENST00000330168 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
AC004997.1-201ENST00000330168 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
AC004997.1-201ENST00000330168 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
AC004997.1-201ENST00000330168 LOC105371045A0A1W2PR82 267 aa24.02■■□□□ 1.44
AC004997.1-201ENST00000330168 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
AC004997.1-201ENST00000330168 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
AC004997.1-201ENST00000330168 CFTRP13569 1480 aa23.88■■□□□ 1.41
AC004997.1-201ENST00000330168 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
AC004997.1-201ENST00000330168 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
AC004997.1-201ENST00000330168 SOGA1O94964 1423 aa23.73■■□□□ 1.39
AC004997.1-201ENST00000330168 DNAJC5BQ9UF47 199 aa23.7■■□□□ 1.38
AC004997.1-201ENST00000330168 EHMT2Q96KQ7 1210 aa23.69■■□□□ 1.38
AC004997.1-201ENST00000330168 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
AC004997.1-201ENST00000330168 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
AC004997.1-201ENST00000330168 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
AC004997.1-201ENST00000330168 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
AC004997.1-201ENST00000330168 CUX1P39880 1505 aa23.61■■□□□ 1.37
AC004997.1-201ENST00000330168 EEA1Q15075 1411 aa23.59■■□□□ 1.37
AC004997.1-201ENST00000330168 NESP48681 1621 aa23.58■■□□□ 1.37
AC004997.1-201ENST00000330168 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
AC004997.1-201ENST00000330168 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
AC004997.1-201ENST00000330168 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
AC004997.1-201ENST00000330168 CEP164Q9UPV0 1460 aa23.33■■□□□ 1.32
AC004997.1-201ENST00000330168 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
AC004997.1-201ENST00000330168 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
AC004997.1-201ENST00000330168 GOLGA3Q08378 1498 aa23.31■■□□□ 1.32
AC004997.1-201ENST00000330168 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
AC004997.1-201ENST00000330168 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
AC004997.1-201ENST00000330168 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
AC004997.1-201ENST00000330168 KIF21BO75037 1637 aa23.29■■□□□ 1.32
AC004997.1-201ENST00000330168 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
AC004997.1-201ENST00000330168 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
AC004997.1-201ENST00000330168 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
AC004997.1-201ENST00000330168 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
AC004997.1-201ENST00000330168 CUX2O14529 1486 aa23.21■■□□□ 1.31
AC004997.1-201ENST00000330168 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
AC004997.1-201ENST00000330168 CEP162Q5TB80 1403 aa23.2■■□□□ 1.3
AC004997.1-201ENST00000330168 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
AC004997.1-201ENST00000330168 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
AC004997.1-201ENST00000330168 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
AC004997.1-201ENST00000330168 IGF1RP08069 1367 aa23.11■■□□□ 1.29
AC004997.1-201ENST00000330168 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
AC004997.1-201ENST00000330168 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
AC004997.1-201ENST00000330168 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
AC004997.1-201ENST00000330168 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
AC004997.1-201ENST00000330168 CLIP1P30622 1438 aa22.98■■□□□ 1.27
AC004997.1-201ENST00000330168 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
AC004997.1-201ENST00000330168 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
AC004997.1-201ENST00000330168 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
AC004997.1-201ENST00000330168 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
AC004997.1-201ENST00000330168 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
AC004997.1-201ENST00000330168 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
AC004997.1-201ENST00000330168 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
AC004997.1-201ENST00000330168 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
AC004997.1-201ENST00000330168 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
AC004997.1-201ENST00000330168 WDR62O43379 1518 aa22.87■■□□□ 1.25
AC004997.1-201ENST00000330168 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
AC004997.1-201ENST00000330168 CUL7Q14999 1698 aa22.81■■□□□ 1.24
AC004997.1-201ENST00000330168 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
AC004997.1-201ENST00000330168 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
AC004997.1-201ENST00000330168 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.23
AC004997.1-201ENST00000330168 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
AC004997.1-201ENST00000330168 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
AC004997.1-201ENST00000330168 HRCP23327 699 aa22.74■■□□□ 1.23
AC004997.1-201ENST00000330168 ARHGAP35Q9NRY4 1499 aa22.71■■□□□ 1.23
AC004997.1-201ENST00000330168 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
AC004997.1-201ENST00000330168 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
AC004997.1-201ENST00000330168 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
AC004997.1-201ENST00000330168 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms