RNA–Protein interactions for RNA: ENST00000330149.9

TRAPPC6B-201, Transcript of trafficking protein particle complex 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-201ENST00000330149 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
TRAPPC6B-201ENST00000330149 ABCC9O60706 1549 aa12.58□□□□□ -0.4
TRAPPC6B-201ENST00000330149 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
TRAPPC6B-201ENST00000330149 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
TRAPPC6B-201ENST00000330149 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC6B-201ENST00000330149 DCAF8L2P0C7V8 631 aa11.73□□□□□ -0.53
TRAPPC6B-201ENST00000330149 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
TRAPPC6B-201ENST00000330149 NACADO15069 1562 aa11.49□□□□□ -0.57
TRAPPC6B-201ENST00000330149 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
TRAPPC6B-201ENST00000330149 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.58
TRAPPC6B-201ENST00000330149 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
TRAPPC6B-201ENST00000330149 CC2D2AQ9P2K1 1620 aa11.26□□□□□ -0.61
TRAPPC6B-201ENST00000330149 AEBP2Q6ZN18 517 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC6B-201ENST00000330149 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
TRAPPC6B-201ENST00000330149 CHIC1Q5VXU3 224 aa11.21□□□□□ -0.62
TRAPPC6B-201ENST00000330149 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
TRAPPC6B-201ENST00000330149 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
TRAPPC6B-201ENST00000330149 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
TRAPPC6B-201ENST00000330149 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
TRAPPC6B-201ENST00000330149 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
TRAPPC6B-201ENST00000330149 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
TRAPPC6B-201ENST00000330149 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
TRAPPC6B-201ENST00000330149 ERCC6Q03468 1493 aa10.84□□□□□ -0.67
TRAPPC6B-201ENST00000330149 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
TRAPPC6B-201ENST00000330149 CUX2O14529 1486 aa10.78□□□□□ -0.68
TRAPPC6B-201ENST00000330149 TRIM41Q8WV44 630 aa10.77□□□□□ -0.68
TRAPPC6B-201ENST00000330149 NESP48681 1621 aa10.74□□□□□ -0.69
TRAPPC6B-201ENST00000330149 NCAPD3P42695 1498 aa10.65□□□□□ -0.7
TRAPPC6B-201ENST00000330149 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
TRAPPC6B-201ENST00000330149 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
TRAPPC6B-201ENST00000330149 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
TRAPPC6B-201ENST00000330149 THOC2Q8NI27 1593 aaKnown RBP10.55□□□□□ -0.72
TRAPPC6B-201ENST00000330149 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
TRAPPC6B-201ENST00000330149 SMARCA4P51532 1647 aa10.52□□□□□ -0.73
TRAPPC6B-201ENST00000330149 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
TRAPPC6B-201ENST00000330149 KIF21AQ7Z4S6 1674 aa10.49□□□□□ -0.73
TRAPPC6B-201ENST00000330149 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
TRAPPC6B-201ENST00000330149 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
TRAPPC6B-201ENST00000330149 MROH2BQ7Z745 1585 aa10.4□□□□□ -0.74
TRAPPC6B-201ENST00000330149 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC6B-201ENST00000330149 CADPSQ9ULU8 1353 aa10.36□□□□□ -0.75
TRAPPC6B-201ENST00000330149 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
TRAPPC6B-201ENST00000330149 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
TRAPPC6B-201ENST00000330149 PEG3Q9GZU2 1588 aa10.34□□□□□ -0.75
TRAPPC6B-201ENST00000330149 WDR62O43379 1518 aa10.32□□□□□ -0.76
TRAPPC6B-201ENST00000330149 CEP164Q9UPV0 1460 aa10.29□□□□□ -0.76
TRAPPC6B-201ENST00000330149 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
TRAPPC6B-201ENST00000330149 WIZO95785 1651 aa10.27□□□□□ -0.77
TRAPPC6B-201ENST00000330149 CYB5RLQ6IPT4 315 aa10.25□□□□□ -0.77
TRAPPC6B-201ENST00000330149 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-201ENST00000330149 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
TRAPPC6B-201ENST00000330149 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
TRAPPC6B-201ENST00000330149 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
TRAPPC6B-201ENST00000330149 URB2Q14146 1524 aaKnown RBP10.21□□□□□ -0.77
TRAPPC6B-201ENST00000330149 ZNF608Q9ULD9 1512 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC6B-201ENST00000330149 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
TRAPPC6B-201ENST00000330149 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
TRAPPC6B-201ENST00000330149 CFTRP13569 1480 aa10.16□□□□□ -0.78
TRAPPC6B-201ENST00000330149 FBLN2P98095 1184 aa10.15□□□□□ -0.78
TRAPPC6B-201ENST00000330149 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAPPC6B-201ENST00000330149 ARAP1Q96P48 1450 aa10.07□□□□□ -0.8
TRAPPC6B-201ENST00000330149 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC6B-201ENST00000330149 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC6B-201ENST00000330149 IFT140Q96RY7 1462 aa10.05□□□□□ -0.8
TRAPPC6B-201ENST00000330149 EIF4G3O43432 1585 aaKnown RBP10.04□□□□□ -0.8
TRAPPC6B-201ENST00000330149 TOPBP1Q92547 1522 aa10.03□□□□□ -0.8
TRAPPC6B-201ENST00000330149 TOP2AP11388 1531 aaKnown RBP10.03□□□□□ -0.8
TRAPPC6B-201ENST00000330149 CHD1O14646 1710 aa10.02□□□□□ -0.81
TRAPPC6B-201ENST00000330149 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
TRAPPC6B-201ENST00000330149 TDRD9Q8NDG6 1382 aaKnown RBP9.98□□□□□ -0.81
TRAPPC6B-201ENST00000330149 RAD54L2Q9Y4B4 1467 aa9.96□□□□□ -0.81
TRAPPC6B-201ENST00000330149 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
TRAPPC6B-201ENST00000330149 TARBP1Q13395 1621 aaKnown RBP9.93□□□□□ -0.82
TRAPPC6B-201ENST00000330149 POLA1P09884 1462 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC6B-201ENST00000330149 CHMP7Q8WUX9 453 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC6B-201ENST00000330149 DNMBPQ6XZF7 1577 aa9.92□□□□□ -0.82
TRAPPC6B-201ENST00000330149 SNAPC4Q5SXM2 1469 aa9.91□□□□□ -0.82
TRAPPC6B-201ENST00000330149 PHF23Q9BUL5 403 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC6B-201ENST00000330149 SOGA1O94964 1423 aa9.88□□□□□ -0.83
TRAPPC6B-201ENST00000330149 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
TRAPPC6B-201ENST00000330149 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
TRAPPC6B-201ENST00000330149 GAPVD1Q14C86 1478 aa9.84□□□□□ -0.83
TRAPPC6B-201ENST00000330149 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
TRAPPC6B-201ENST00000330149 SYNJ1O43426 1573 aa9.82□□□□□ -0.84
TRAPPC6B-201ENST00000330149 ERCC6L2Q5T890 1561 aa9.81□□□□□ -0.84
TRAPPC6B-201ENST00000330149 SYNJ2O15056 1496 aa9.78□□□□□ -0.84
TRAPPC6B-201ENST00000330149 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
TRAPPC6B-201ENST00000330149 MAGI1Q96QZ7 1491 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC6B-201ENST00000330149 CUX1P39880 1505 aa9.77□□□□□ -0.85
TRAPPC6B-201ENST00000330149 KCNA4P22459 653 aa9.76□□□□□ -0.85
TRAPPC6B-201ENST00000330149 ILDR1Q86SU0 546 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC6B-201ENST00000330149 PBRM1Q86U86 1689 aa9.71□□□□□ -0.86
TRAPPC6B-201ENST00000330149 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
TRAPPC6B-201ENST00000330149 CEP170Q5SW79 1584 aa9.68□□□□□ -0.86
TRAPPC6B-201ENST00000330149 KDM4FA0A1W2PPD8 638 aa9.68□□□□□ -0.86
TRAPPC6B-201ENST00000330149 GRIN2AQ12879 1464 aa9.68□□□□□ -0.86
TRAPPC6B-201ENST00000330149 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
TRAPPC6B-201ENST00000330149 KIF13AQ9H1H9 1805 aa9.66□□□□□ -0.86
TRAPPC6B-201ENST00000330149 TTBK1Q5TCY1 1321 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC6B-201ENST00000330149 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms