RNA–Protein interactions for RNA: ENST00000328344.2

LINC00334-201, long intergenic non-protein coding RNA 334, humanhuman

TSL 2

Gene LINC00334, Length 530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00334-201ENST00000328344 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
LINC00334-201ENST00000328344 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
LINC00334-201ENST00000328344 ABCC9O60706 1549 aa26.42■■□□□ 1.82
LINC00334-201ENST00000328344 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
LINC00334-201ENST00000328344 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
LINC00334-201ENST00000328344 NACADO15069 1562 aa25.44■■□□□ 1.66
LINC00334-201ENST00000328344 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
LINC00334-201ENST00000328344 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
LINC00334-201ENST00000328344 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
LINC00334-201ENST00000328344 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
LINC00334-201ENST00000328344 SCRIBQ14160 1630 aa24.77■■□□□ 1.56
LINC00334-201ENST00000328344 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
LINC00334-201ENST00000328344 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.54
LINC00334-201ENST00000328344 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
LINC00334-201ENST00000328344 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
LINC00334-201ENST00000328344 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
LINC00334-201ENST00000328344 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
LINC00334-201ENST00000328344 CECR2Q9BXF3 1484 aa23.8■■□□□ 1.4
LINC00334-201ENST00000328344 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
LINC00334-201ENST00000328344 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
LINC00334-201ENST00000328344 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
LINC00334-201ENST00000328344 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
LINC00334-201ENST00000328344 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
LINC00334-201ENST00000328344 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
LINC00334-201ENST00000328344 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
LINC00334-201ENST00000328344 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
LINC00334-201ENST00000328344 WIZO95785 1651 aa23.33■■□□□ 1.33
LINC00334-201ENST00000328344 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
LINC00334-201ENST00000328344 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
LINC00334-201ENST00000328344 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
LINC00334-201ENST00000328344 NESP48681 1621 aa22.92■■□□□ 1.26
LINC00334-201ENST00000328344 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
LINC00334-201ENST00000328344 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
LINC00334-201ENST00000328344 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
LINC00334-201ENST00000328344 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
LINC00334-201ENST00000328344 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
LINC00334-201ENST00000328344 CFTRP13569 1480 aa22.69■■□□□ 1.22
LINC00334-201ENST00000328344 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
LINC00334-201ENST00000328344 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
LINC00334-201ENST00000328344 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
LINC00334-201ENST00000328344 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
LINC00334-201ENST00000328344 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
LINC00334-201ENST00000328344 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
LINC00334-201ENST00000328344 CUX2O14529 1486 aa22.45■■□□□ 1.18
LINC00334-201ENST00000328344 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
LINC00334-201ENST00000328344 WDR62O43379 1518 aa22.38■■□□□ 1.17
LINC00334-201ENST00000328344 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
LINC00334-201ENST00000328344 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
LINC00334-201ENST00000328344 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
LINC00334-201ENST00000328344 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
LINC00334-201ENST00000328344 CUX1P39880 1505 aa22.1■■□□□ 1.13
LINC00334-201ENST00000328344 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
LINC00334-201ENST00000328344 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
LINC00334-201ENST00000328344 FGD5Q6ZNL6 1462 aa21.99■■□□□ 1.11
LINC00334-201ENST00000328344 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
LINC00334-201ENST00000328344 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
LINC00334-201ENST00000328344 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
LINC00334-201ENST00000328344 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
LINC00334-201ENST00000328344 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
LINC00334-201ENST00000328344 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
LINC00334-201ENST00000328344 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
LINC00334-201ENST00000328344 SOGA1O94964 1423 aa21.9■■□□□ 1.1
LINC00334-201ENST00000328344 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
LINC00334-201ENST00000328344 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
LINC00334-201ENST00000328344 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.08
LINC00334-201ENST00000328344 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
LINC00334-201ENST00000328344 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
LINC00334-201ENST00000328344 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
LINC00334-201ENST00000328344 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
LINC00334-201ENST00000328344 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
LINC00334-201ENST00000328344 GRIN2BQ13224 1484 aa21.64■■□□□ 1.06
LINC00334-201ENST00000328344 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
LINC00334-201ENST00000328344 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
LINC00334-201ENST00000328344 CHD1O14646 1710 aa21.6■■□□□ 1.05
LINC00334-201ENST00000328344 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
LINC00334-201ENST00000328344 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
LINC00334-201ENST00000328344 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
LINC00334-201ENST00000328344 FBLN2P98095 1184 aa21.5■■□□□ 1.03
LINC00334-201ENST00000328344 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
LINC00334-201ENST00000328344 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
LINC00334-201ENST00000328344 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
LINC00334-201ENST00000328344 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
LINC00334-201ENST00000328344 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
LINC00334-201ENST00000328344 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
LINC00334-201ENST00000328344 IGF1RP08069 1367 aa21.39■■□□□ 1.02
LINC00334-201ENST00000328344 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
LINC00334-201ENST00000328344 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
LINC00334-201ENST00000328344 CUL7Q14999 1698 aa21.34■■□□□ 1.01
LINC00334-201ENST00000328344 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
LINC00334-201ENST00000328344 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
LINC00334-201ENST00000328344 CEP170Q5SW79 1584 aa21.3■■□□□ 1
LINC00334-201ENST00000328344 NUP160Q12769 1436 aa21.28■■□□□ 1
LINC00334-201ENST00000328344 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
LINC00334-201ENST00000328344 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
LINC00334-201ENST00000328344 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
LINC00334-201ENST00000328344 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
LINC00334-201ENST00000328344 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
LINC00334-201ENST00000328344 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
LINC00334-201ENST00000328344 SHROOM2Q13796 1616 aa21.13■□□□□ 0.97
LINC00334-201ENST00000328344 EEA1Q15075 1411 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms