RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 NISCHQ9Y2I1 1504 aa52.9■■■■■ 6.06
TNRC18-201ENST00000328270 CCDC180Q9P1Z9 1646 aa47.16■■■■■ 5.14
TNRC18-201ENST00000328270 ABCC9O60706 1549 aa46.22■■■■■ 4.99
TNRC18-201ENST00000328270 RB1CC1Q8TDY2 1594 aa44.42■■■■■ 4.7
TNRC18-201ENST00000328270 NACADO15069 1562 aa44.31■■■■■ 4.68
TNRC18-201ENST00000328270 DCAF8L2P0C7V8 631 aa44.19■■■■■ 4.66
TNRC18-201ENST00000328270 ZCCHC6Q5VYS8 1495 aaKnown RBP44.05■■■■■ 4.64
TNRC18-201ENST00000328270 MYO15BQ96JP2 1530 aa43.99■■■■■ 4.63
TNRC18-201ENST00000328270 DCAF1Q9Y4B6 1507 aa43.76■■■■■ 4.6
TNRC18-201ENST00000328270 UNC13AQ9UPW8 1703 aa43.52■■■■■ 4.56
TNRC18-201ENST00000328270 PABPN1Q86U42 306 aaKnown RBP eCLIP43.11■■■■■ 4.49
TNRC18-201ENST00000328270 BICRAQ9NZM4 1560 aa43.09■■■■■ 4.49
TNRC18-201ENST00000328270 SCRIBQ14160 1630 aa43.01■■■■■ 4.48
TNRC18-201ENST00000328270 SHROOM4Q9ULL8 1493 aa42.59■■■■■ 4.41
TNRC18-201ENST00000328270 DNAJC5BQ9UF47 199 aa42.49■■■■■ 4.39
TNRC18-201ENST00000328270 EIF4G1Q04637 1599 aaKnown RBP41.96■■■■■ 4.31
TNRC18-201ENST00000328270 CC2D2AQ9P2K1 1620 aa41.83■■■■■ 4.29
TNRC18-201ENST00000328270 CECR2Q9BXF3 1484 aa41.53■■■■■ 4.24
TNRC18-201ENST00000328270 SMARCA4P51532 1647 aa41.11■■■■■ 4.17
TNRC18-201ENST00000328270 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
TNRC18-201ENST00000328270 ATAD2BQ9ULI0 1458 aa40.88■■■■■ 4.13
TNRC18-201ENST00000328270 NCAPD3P42695 1498 aa40.85■■■■■ 4.13
TNRC18-201ENST00000328270 SMARCA2P51531 1590 aa40.84■■■■■ 4.13
TNRC18-201ENST00000328270 MROH2BQ7Z745 1585 aa40.78■■■■■ 4.12
TNRC18-201ENST00000328270 PEG3Q9GZU2 1588 aa40.69■■■■■ 4.11
TNRC18-201ENST00000328270 HMGXB3Q12766 1538 aa40.69■■■■■ 4.1
TNRC18-201ENST00000328270 BAZ1BQ9UIG0 1483 aaKnown RBP40.55■■■■■ 4.08
TNRC18-201ENST00000328270 WIZO95785 1651 aa40.37■■■■■ 4.05
TNRC18-201ENST00000328270 RSF1Q96T23 1441 aaPredicted RBP40.23■■■■■ 4.03
TNRC18-201ENST00000328270 NESP48681 1621 aa39.96■■■■□ 3.99
TNRC18-201ENST00000328270 TOP2AP11388 1531 aaKnown RBP39.91■■■■□ 3.98
TNRC18-201ENST00000328270 LAMC3Q9Y6N6 1575 aa39.85■■■■□ 3.97
TNRC18-201ENST00000328270 ERCC6Q03468 1493 aa39.84■■■■□ 3.97
TNRC18-201ENST00000328270 CADPSQ9ULU8 1353 aa39.65■■■■□ 3.94
TNRC18-201ENST00000328270 KIF21AQ7Z4S6 1674 aa39.56■■■■□ 3.92
TNRC18-201ENST00000328270 PDS5BQ9NTI5 1447 aa39.54■■■■□ 3.92
TNRC18-201ENST00000328270 CUX2O14529 1486 aa39.46■■■■□ 3.91
TNRC18-201ENST00000328270 THOC2Q8NI27 1593 aaKnown RBP39.43■■■■□ 3.9
TNRC18-201ENST00000328270 CCDC88BA6NC98 1476 aa39.41■■■■□ 3.9
TNRC18-201ENST00000328270 CFTRP13569 1480 aa39.41■■■■□ 3.9
TNRC18-201ENST00000328270 PRDM2Q13029 1718 aa39.26■■■■□ 3.87
TNRC18-201ENST00000328270 FANCD2Q9BXW9 1451 aa39.24■■■■□ 3.87
TNRC18-201ENST00000328270 CEP164Q9UPV0 1460 aa39.21■■■■□ 3.87
TNRC18-201ENST00000328270 MRC2Q9UBG0 1479 aa39.17■■■■□ 3.86
TNRC18-201ENST00000328270 SUPT5HO00267 1087 aaKnown RBP39.09■■■■□ 3.85
TNRC18-201ENST00000328270 WDR62O43379 1518 aa39.06■■■■□ 3.84
TNRC18-201ENST00000328270 URB2Q14146 1524 aaKnown RBP38.87■■■■□ 3.81
TNRC18-201ENST00000328270 TOPBP1Q92547 1522 aa38.6■■■■□ 3.77
TNRC18-201ENST00000328270 ABCC8Q09428 1581 aa38.57■■■■□ 3.76
TNRC18-201ENST00000328270 DNMBPQ6XZF7 1577 aa38.57■■■■□ 3.76
TNRC18-201ENST00000328270 IFT140Q96RY7 1462 aa38.37■■■■□ 3.73
TNRC18-201ENST00000328270 DNAJC5Q9H3Z4 198 aa38.36■■■■□ 3.73
TNRC18-201ENST00000328270 CUX1P39880 1505 aa38.28■■■■□ 3.72
TNRC18-201ENST00000328270 POLA1P09884 1462 aaPredicted RBP38.26■■■■□ 3.72
TNRC18-201ENST00000328270 ZNF608Q9ULD9 1512 aaPredicted RBP38.22■■■■□ 3.71
TNRC18-201ENST00000328270 TARBP1Q13395 1621 aaKnown RBP38.22■■■■□ 3.71
TNRC18-201ENST00000328270 FGD5Q6ZNL6 1462 aa38.15■■■■□ 3.7
TNRC18-201ENST00000328270 EIF4G3O43432 1585 aaKnown RBP38.12■■■■□ 3.69
TNRC18-201ENST00000328270 RAD54L2Q9Y4B4 1467 aa38.09■■■■□ 3.69
TNRC18-201ENST00000328270 SOGA1O94964 1423 aa38.07■■■■□ 3.69
TNRC18-201ENST00000328270 AQRO60306 1485 aaKnown RBP eCLIP37.97■■■■□ 3.671e-6■■■■□ 26.1
TNRC18-201ENST00000328270 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
TNRC18-201ENST00000328270 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
TNRC18-201ENST00000328270 WDR97A6NE52 1622 aa37.92■■■■□ 3.66
TNRC18-201ENST00000328270 TOP2BQ02880 1626 aa37.91■■■■□ 3.66
TNRC18-201ENST00000328270 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
TNRC18-201ENST00000328270 TDRD9Q8NDG6 1382 aaKnown RBP37.87■■■■□ 3.65
TNRC18-201ENST00000328270 ABCA10Q8WWZ4 1543 aa37.77■■■■□ 3.64
TNRC18-201ENST00000328270 OSCARQ8IYS5 282 aa37.74■■■■□ 3.63
TNRC18-201ENST00000328270 CHD1O14646 1710 aa37.71■■■■□ 3.63
TNRC18-201ENST00000328270 PBRM1Q86U86 1689 aa37.68■■■■□ 3.62
TNRC18-201ENST00000328270 ABCA5Q8WWZ7 1642 aa37.68■■■■□ 3.62
TNRC18-201ENST00000328270 GRIN2BQ13224 1484 aa37.66■■■■□ 3.62
TNRC18-201ENST00000328270 GAPVD1Q14C86 1478 aa37.64■■■■□ 3.62
TNRC18-201ENST00000328270 SNAPC4Q5SXM2 1469 aa37.64■■■■□ 3.62
TNRC18-201ENST00000328270 MAGI1Q96QZ7 1491 aaPredicted RBP37.58■■■■□ 3.61
TNRC18-201ENST00000328270 FBLN2P98095 1184 aa37.52■■■■□ 3.6
TNRC18-201ENST00000328270 SYNJ2O15056 1496 aa37.44■■■■□ 3.58
TNRC18-201ENST00000328270 CHMP7Q8WUX9 453 aaPredicted RBP37.39■■■■□ 3.58
TNRC18-201ENST00000328270 ADAMTS12P58397 1594 aa37.33■■■■□ 3.57
TNRC18-201ENST00000328270 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.57
TNRC18-201ENST00000328270 RIMBP3CA6NJZ7 1639 aa37.27■■■■□ 3.56
TNRC18-201ENST00000328270 RIMBP3BA6NNM3 1639 aa37.27■■■■□ 3.56
TNRC18-201ENST00000328270 RIMBP3Q9UFD9 1639 aa37.27■■■■□ 3.56
TNRC18-201ENST00000328270 CLASP1Q7Z460 1538 aa37.24■■■■□ 3.55
TNRC18-201ENST00000328270 ARHGEF11O15085 1522 aa37.21■■■■□ 3.55
TNRC18-201ENST00000328270 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
TNRC18-201ENST00000328270 GRIN2AQ12879 1464 aa37.19■■■■□ 3.54
TNRC18-201ENST00000328270 KIF27Q86VH2 1401 aa37.15■■■■□ 3.54
TNRC18-201ENST00000328270 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
TNRC18-201ENST00000328270 CEP170Q5SW79 1584 aa37.04■■■■□ 3.52
TNRC18-201ENST00000328270 NUP160Q12769 1436 aa37.02■■■■□ 3.52
TNRC18-201ENST00000328270 CUL7Q14999 1698 aa37■■■■□ 3.51
TNRC18-201ENST00000328270 IGF1RP08069 1367 aa37■■■■□ 3.51
TNRC18-201ENST00000328270 ARAP1Q96P48 1450 aa36.91■■■■□ 3.5
TNRC18-201ENST00000328270 CYB5RLQ6IPT4 315 aa36.81■■■■□ 3.48
TNRC18-201ENST00000328270 SHROOM2Q13796 1616 aa36.81■■■■□ 3.48
TNRC18-201ENST00000328270 RUSC2Q8N2Y8 1516 aa36.8■■■■□ 3.48
TNRC18-201ENST00000328270 CARMIL1Q5VZK9 1371 aa36.78■■■■□ 3.48
TNRC18-201ENST00000328270 ERCC6L2Q5T890 1561 aa36.72■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms