RNA–Protein interactions for RNA: ENST00000326597.6

GGA1-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-202ENST00000326597 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
GGA1-202ENST00000326597 ABCC9O60706 1549 aa34.95■■■■□ 3.19
GGA1-202ENST00000326597 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
GGA1-202ENST00000326597 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
GGA1-202ENST00000326597 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
GGA1-202ENST00000326597 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
GGA1-202ENST00000326597 PABPN1Q86U42 306 aaKnown RBP eCLIP32.63■■■□□ 2.815e-13■■□□□ 11.6
GGA1-202ENST00000326597 NACADO15069 1562 aa32.62■■■□□ 2.81
GGA1-202ENST00000326597 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
GGA1-202ENST00000326597 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
GGA1-202ENST00000326597 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
GGA1-202ENST00000326597 ZCCHC6Q5VYS8 1495 aaKnown RBP31.66■■■□□ 2.66
GGA1-202ENST00000326597 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
GGA1-202ENST00000326597 SCRIBQ14160 1630 aa31.48■■■□□ 2.63
GGA1-202ENST00000326597 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
GGA1-202ENST00000326597 CC2D2AQ9P2K1 1620 aa31.42■■■□□ 2.62
GGA1-202ENST00000326597 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
GGA1-202ENST00000326597 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
GGA1-202ENST00000326597 DNAJC5Q9H3Z4 198 aa30.58■■■□□ 2.49
GGA1-202ENST00000326597 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
GGA1-202ENST00000326597 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
GGA1-202ENST00000326597 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
GGA1-202ENST00000326597 CUX2O14529 1486 aa30.09■■■□□ 2.41
GGA1-202ENST00000326597 NESP48681 1621 aa29.93■■■□□ 2.38
GGA1-202ENST00000326597 SMARCA4P51532 1647 aa29.91■■■□□ 2.38
GGA1-202ENST00000326597 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
GGA1-202ENST00000326597 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
GGA1-202ENST00000326597 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
GGA1-202ENST00000326597 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
GGA1-202ENST00000326597 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
GGA1-202ENST00000326597 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
GGA1-202ENST00000326597 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
GGA1-202ENST00000326597 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
GGA1-202ENST00000326597 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
GGA1-202ENST00000326597 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
GGA1-202ENST00000326597 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
GGA1-202ENST00000326597 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
GGA1-202ENST00000326597 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
GGA1-202ENST00000326597 WIZO95785 1651 aa29.16■■■□□ 2.26
GGA1-202ENST00000326597 WDR62O43379 1518 aa29.07■■■□□ 2.24
GGA1-202ENST00000326597 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
GGA1-202ENST00000326597 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
GGA1-202ENST00000326597 CFTRP13569 1480 aa28.88■■■□□ 2.21
GGA1-202ENST00000326597 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
GGA1-202ENST00000326597 OSCARQ8IYS5 282 aa28.83■■■□□ 2.21
GGA1-202ENST00000326597 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
GGA1-202ENST00000326597 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
GGA1-202ENST00000326597 CCDC88BA6NC98 1476 aa28.52■■■□□ 2.16
GGA1-202ENST00000326597 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
GGA1-202ENST00000326597 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
GGA1-202ENST00000326597 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
GGA1-202ENST00000326597 RIMBP3CA6NJZ7 1639 aa28.35■■■□□ 2.13
GGA1-202ENST00000326597 RIMBP3BA6NNM3 1639 aa28.35■■■□□ 2.13
GGA1-202ENST00000326597 RIMBP3Q9UFD9 1639 aa28.35■■■□□ 2.13
GGA1-202ENST00000326597 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
GGA1-202ENST00000326597 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
GGA1-202ENST00000326597 CYB5RLQ6IPT4 315 aa28.26■■■□□ 2.11
GGA1-202ENST00000326597 AQRO60306 1485 aaKnown RBP eCLIP28.25■■■□□ 2.11
GGA1-202ENST00000326597 FBLN2P98095 1184 aa28.24■■■□□ 2.11
GGA1-202ENST00000326597 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.11
GGA1-202ENST00000326597 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
GGA1-202ENST00000326597 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
GGA1-202ENST00000326597 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
GGA1-202ENST00000326597 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
GGA1-202ENST00000326597 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
GGA1-202ENST00000326597 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
GGA1-202ENST00000326597 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
GGA1-202ENST00000326597 SOGA1O94964 1423 aa28.01■■■□□ 2.07
GGA1-202ENST00000326597 CHD1O14646 1710 aa28■■■□□ 2.07
GGA1-202ENST00000326597 ARAP1Q96P48 1450 aa28■■■□□ 2.07
GGA1-202ENST00000326597 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
GGA1-202ENST00000326597 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.05
GGA1-202ENST00000326597 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
GGA1-202ENST00000326597 CUX1P39880 1505 aa27.79■■■□□ 2.04
GGA1-202ENST00000326597 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
GGA1-202ENST00000326597 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
GGA1-202ENST00000326597 MAGI1Q96QZ7 1491 aaPredicted RBP27.71■■■□□ 2.03
GGA1-202ENST00000326597 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
GGA1-202ENST00000326597 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
GGA1-202ENST00000326597 WDR97A6NE52 1622 aa27.64■■■□□ 2.02
GGA1-202ENST00000326597 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
GGA1-202ENST00000326597 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
GGA1-202ENST00000326597 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
GGA1-202ENST00000326597 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
GGA1-202ENST00000326597 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
GGA1-202ENST00000326597 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
GGA1-202ENST00000326597 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.97
GGA1-202ENST00000326597 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
GGA1-202ENST00000326597 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
GGA1-202ENST00000326597 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
GGA1-202ENST00000326597 NUP160Q12769 1436 aa27.27■■□□□ 1.96
GGA1-202ENST00000326597 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
GGA1-202ENST00000326597 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
GGA1-202ENST00000326597 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
GGA1-202ENST00000326597 PRG4Q92954 1404 aaPredicted RBP27.14■■□□□ 1.93
GGA1-202ENST00000326597 JPH4Q96JJ6 628 aa27.12■■□□□ 1.93
GGA1-202ENST00000326597 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
GGA1-202ENST00000326597 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
GGA1-202ENST00000326597 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
GGA1-202ENST00000326597 FAM69CQ0P6D2 419 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms