RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
CCNC-201ENST00000326298 ABCC9O60706 1549 aa18.21■□□□□ 0.51
CCNC-201ENST00000326298 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
CCNC-201ENST00000326298 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
CCNC-201ENST00000326298 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
CCNC-201ENST00000326298 NACADO15069 1562 aa17.14■□□□□ 0.33
CCNC-201ENST00000326298 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
CCNC-201ENST00000326298 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCNC-201ENST00000326298 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
CCNC-201ENST00000326298 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
CCNC-201ENST00000326298 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
CCNC-201ENST00000326298 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
CCNC-201ENST00000326298 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
CCNC-201ENST00000326298 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
CCNC-201ENST00000326298 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
CCNC-201ENST00000326298 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
CCNC-201ENST00000326298 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
CCNC-201ENST00000326298 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
CCNC-201ENST00000326298 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
CCNC-201ENST00000326298 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
CCNC-201ENST00000326298 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
CCNC-201ENST00000326298 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
CCNC-201ENST00000326298 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
CCNC-201ENST00000326298 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
CCNC-201ENST00000326298 HMGXB3Q12766 1538 aa15.72■□□□□ 0.11
CCNC-201ENST00000326298 NESP48681 1621 aa15.71■□□□□ 0.11
CCNC-201ENST00000326298 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
CCNC-201ENST00000326298 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
CCNC-201ENST00000326298 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
CCNC-201ENST00000326298 WIZO95785 1651 aa15.55■□□□□ 0.08
CCNC-201ENST00000326298 CUX2O14529 1486 aa15.53■□□□□ 0.08
CCNC-201ENST00000326298 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.07
CCNC-201ENST00000326298 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.06
CCNC-201ENST00000326298 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
CCNC-201ENST00000326298 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
CCNC-201ENST00000326298 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CCNC-201ENST00000326298 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
CCNC-201ENST00000326298 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
CCNC-201ENST00000326298 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
CCNC-201ENST00000326298 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
CCNC-201ENST00000326298 CFTRP13569 1480 aa15.25■□□□□ 0.03
CCNC-201ENST00000326298 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
CCNC-201ENST00000326298 WDR62O43379 1518 aa15.23■□□□□ 0.03
CCNC-201ENST00000326298 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
CCNC-201ENST00000326298 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
CCNC-201ENST00000326298 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
CCNC-201ENST00000326298 PRDM2Q13029 1718 aa15.02■□□□□ -0
CCNC-201ENST00000326298 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
CCNC-201ENST00000326298 TOPBP1Q92547 1522 aa14.96□□□□□ -0.01
CCNC-201ENST00000326298 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
CCNC-201ENST00000326298 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
CCNC-201ENST00000326298 OSCARQ8IYS5 282 aa14.89□□□□□ -0.03
CCNC-201ENST00000326298 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
CCNC-201ENST00000326298 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
CCNC-201ENST00000326298 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCNC-201ENST00000326298 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
CCNC-201ENST00000326298 EIF4G3O43432 1585 aaKnown RBP14.83□□□□□ -0.04
CCNC-201ENST00000326298 POLA1P09884 1462 aaPredicted RBP14.83□□□□□ -0.04
CCNC-201ENST00000326298 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.04
CCNC-201ENST00000326298 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
CCNC-201ENST00000326298 CUX1P39880 1505 aa14.77□□□□□ -0.04
CCNC-201ENST00000326298 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.05
CCNC-201ENST00000326298 FGD5Q6ZNL6 1462 aa14.75□□□□□ -0.05
CCNC-201ENST00000326298 SOGA1O94964 1423 aa14.75□□□□□ -0.05
CCNC-201ENST00000326298 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
CCNC-201ENST00000326298 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
CCNC-201ENST00000326298 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
CCNC-201ENST00000326298 CHD1O14646 1710 aa14.71□□□□□ -0.06
CCNC-201ENST00000326298 FBLN2P98095 1184 aa14.7□□□□□ -0.06
CCNC-201ENST00000326298 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
CCNC-201ENST00000326298 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
CCNC-201ENST00000326298 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
CCNC-201ENST00000326298 CYB5RLQ6IPT4 315 aa14.6□□□□□ -0.07
CCNC-201ENST00000326298 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
CCNC-201ENST00000326298 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
CCNC-201ENST00000326298 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
CCNC-201ENST00000326298 GAPVD1Q14C86 1478 aa14.56□□□□□ -0.08
CCNC-201ENST00000326298 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
CCNC-201ENST00000326298 ABCA10Q8WWZ4 1543 aa14.55□□□□□ -0.08
CCNC-201ENST00000326298 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
CCNC-201ENST00000326298 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
CCNC-201ENST00000326298 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
CCNC-201ENST00000326298 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
CCNC-201ENST00000326298 SYNJ2O15056 1496 aa14.52□□□□□ -0.08
CCNC-201ENST00000326298 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
CCNC-201ENST00000326298 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
CCNC-201ENST00000326298 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
CCNC-201ENST00000326298 ERCC6L2Q5T890 1561 aa14.42□□□□□ -0.1
CCNC-201ENST00000326298 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
CCNC-201ENST00000326298 ADAMTS12P58397 1594 aa14.41□□□□□ -0.1
CCNC-201ENST00000326298 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
CCNC-201ENST00000326298 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
CCNC-201ENST00000326298 NUP160Q12769 1436 aa14.36□□□□□ -0.11
CCNC-201ENST00000326298 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
CCNC-201ENST00000326298 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
CCNC-201ENST00000326298 SHROOM2Q13796 1616 aa14.28□□□□□ -0.12
CCNC-201ENST00000326298 IGF1RP08069 1367 aa14.26□□□□□ -0.13
CCNC-201ENST00000326298 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
CCNC-201ENST00000326298 PRG4Q92954 1404 aaPredicted RBP14.23□□□□□ -0.13
CCNC-201ENST00000326298 RUSC2Q8N2Y8 1516 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms