RNA–Protein interactions for RNA: ENST00000326044.9

ZNF561-202, Transcript of zinc finger protein 561, humanhuman

TSL 2 BASIC

Gene ZNF561, Length 2,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-202ENST00000326044 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
ZNF561-202ENST00000326044 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
ZNF561-202ENST00000326044 ABCC9O60706 1549 aa19.78■□□□□ 0.76
ZNF561-202ENST00000326044 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
ZNF561-202ENST00000326044 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
ZNF561-202ENST00000326044 NACADO15069 1562 aa19.19■□□□□ 0.66
ZNF561-202ENST00000326044 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
ZNF561-202ENST00000326044 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
ZNF561-202ENST00000326044 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
ZNF561-202ENST00000326044 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
ZNF561-202ENST00000326044 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
ZNF561-202ENST00000326044 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
ZNF561-202ENST00000326044 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
ZNF561-202ENST00000326044 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
ZNF561-202ENST00000326044 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
ZNF561-202ENST00000326044 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
ZNF561-202ENST00000326044 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
ZNF561-202ENST00000326044 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
ZNF561-202ENST00000326044 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
ZNF561-202ENST00000326044 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
ZNF561-202ENST00000326044 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
ZNF561-202ENST00000326044 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
ZNF561-202ENST00000326044 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
ZNF561-202ENST00000326044 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
ZNF561-202ENST00000326044 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
ZNF561-202ENST00000326044 WIZO95785 1651 aa17.7■□□□□ 0.42
ZNF561-202ENST00000326044 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
ZNF561-202ENST00000326044 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
ZNF561-202ENST00000326044 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
ZNF561-202ENST00000326044 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
ZNF561-202ENST00000326044 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
ZNF561-202ENST00000326044 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
ZNF561-202ENST00000326044 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
ZNF561-202ENST00000326044 NESP48681 1621 aa17.2■□□□□ 0.34
ZNF561-202ENST00000326044 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
ZNF561-202ENST00000326044 CFTRP13569 1480 aa17.14■□□□□ 0.34
ZNF561-202ENST00000326044 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
ZNF561-202ENST00000326044 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
ZNF561-202ENST00000326044 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
ZNF561-202ENST00000326044 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
ZNF561-202ENST00000326044 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
ZNF561-202ENST00000326044 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
ZNF561-202ENST00000326044 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
ZNF561-202ENST00000326044 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
ZNF561-202ENST00000326044 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
ZNF561-202ENST00000326044 WDR62O43379 1518 aa16.82■□□□□ 0.28
ZNF561-202ENST00000326044 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
ZNF561-202ENST00000326044 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
ZNF561-202ENST00000326044 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
ZNF561-202ENST00000326044 CUX1P39880 1505 aa16.76■□□□□ 0.27
ZNF561-202ENST00000326044 CUX2O14529 1486 aa16.74■□□□□ 0.27
ZNF561-202ENST00000326044 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
ZNF561-202ENST00000326044 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
ZNF561-202ENST00000326044 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
ZNF561-202ENST00000326044 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
ZNF561-202ENST00000326044 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
ZNF561-202ENST00000326044 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
ZNF561-202ENST00000326044 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
ZNF561-202ENST00000326044 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
ZNF561-202ENST00000326044 SOGA1O94964 1423 aa16.57■□□□□ 0.24
ZNF561-202ENST00000326044 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
ZNF561-202ENST00000326044 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
ZNF561-202ENST00000326044 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
ZNF561-202ENST00000326044 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
ZNF561-202ENST00000326044 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
ZNF561-202ENST00000326044 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
ZNF561-202ENST00000326044 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
ZNF561-202ENST00000326044 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
ZNF561-202ENST00000326044 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
ZNF561-202ENST00000326044 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■■■ 29
ZNF561-202ENST00000326044 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
ZNF561-202ENST00000326044 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
ZNF561-202ENST00000326044 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
ZNF561-202ENST00000326044 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
ZNF561-202ENST00000326044 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
ZNF561-202ENST00000326044 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
ZNF561-202ENST00000326044 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
ZNF561-202ENST00000326044 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
ZNF561-202ENST00000326044 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
ZNF561-202ENST00000326044 CUL7Q14999 1698 aa16.24■□□□□ 0.19
ZNF561-202ENST00000326044 IGF1RP08069 1367 aa16.24■□□□□ 0.19
ZNF561-202ENST00000326044 EEA1Q15075 1411 aa16.23■□□□□ 0.19
ZNF561-202ENST00000326044 CHD1O14646 1710 aa16.22■□□□□ 0.19
ZNF561-202ENST00000326044 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
ZNF561-202ENST00000326044 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
ZNF561-202ENST00000326044 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
ZNF561-202ENST00000326044 FBLN2P98095 1184 aa16.17■□□□□ 0.18
ZNF561-202ENST00000326044 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
ZNF561-202ENST00000326044 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
ZNF561-202ENST00000326044 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
ZNF561-202ENST00000326044 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
ZNF561-202ENST00000326044 PRXQ9BXM0 1461 aa16.11■□□□□ 0.17
ZNF561-202ENST00000326044 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
ZNF561-202ENST00000326044 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
ZNF561-202ENST00000326044 KIF21BO75037 1637 aa16.07■□□□□ 0.16
ZNF561-202ENST00000326044 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
ZNF561-202ENST00000326044 NUP160Q12769 1436 aa16.06■□□□□ 0.16
ZNF561-202ENST00000326044 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
ZNF561-202ENST00000326044 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
ZNF561-202ENST00000326044 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms