RNA–Protein interactions for RNA: ENST00000325577.8

RAD1-201, Transcript of RAD1 checkpoint DNA exonuclease, humanhuman

TSL 1 (best)

Gene RAD1, Length 1,153 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1-201ENST00000325577 NISCHQ9Y2I1 1504 aa34.3■■■■□ 3.08
RAD1-201ENST00000325577 ABCC9O60706 1549 aa30.57■■■□□ 2.49
RAD1-201ENST00000325577 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
RAD1-201ENST00000325577 RB1CC1Q8TDY2 1594 aa29.02■■■□□ 2.24
RAD1-201ENST00000325577 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
RAD1-201ENST00000325577 NACADO15069 1562 aa28.88■■■□□ 2.21
RAD1-201ENST00000325577 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
RAD1-201ENST00000325577 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
RAD1-201ENST00000325577 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
RAD1-201ENST00000325577 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
RAD1-201ENST00000325577 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
RAD1-201ENST00000325577 BICRAQ9NZM4 1560 aa28.38■■■□□ 2.13
RAD1-201ENST00000325577 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
RAD1-201ENST00000325577 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
RAD1-201ENST00000325577 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
RAD1-201ENST00000325577 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
RAD1-201ENST00000325577 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
RAD1-201ENST00000325577 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
RAD1-201ENST00000325577 NCAPD3P42695 1498 aa26.75■■□□□ 1.87
RAD1-201ENST00000325577 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
RAD1-201ENST00000325577 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
RAD1-201ENST00000325577 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
RAD1-201ENST00000325577 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
RAD1-201ENST00000325577 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
RAD1-201ENST00000325577 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
RAD1-201ENST00000325577 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
RAD1-201ENST00000325577 NESP48681 1621 aa26.39■■□□□ 1.81
RAD1-201ENST00000325577 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
RAD1-201ENST00000325577 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
RAD1-201ENST00000325577 WIZO95785 1651 aa26.17■■□□□ 1.78
RAD1-201ENST00000325577 CUX2O14529 1486 aa26.14■■□□□ 1.78
RAD1-201ENST00000325577 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
RAD1-201ENST00000325577 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
RAD1-201ENST00000325577 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
RAD1-201ENST00000325577 THOC2Q8NI27 1593 aaKnown RBP25.98■■□□□ 1.75
RAD1-201ENST00000325577 KIF21AQ7Z4S6 1674 aa25.95■■□□□ 1.74
RAD1-201ENST00000325577 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
RAD1-201ENST00000325577 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
RAD1-201ENST00000325577 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
RAD1-201ENST00000325577 CFTRP13569 1480 aa25.68■■□□□ 1.7
RAD1-201ENST00000325577 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
RAD1-201ENST00000325577 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
RAD1-201ENST00000325577 WDR62O43379 1518 aa25.63■■□□□ 1.69
RAD1-201ENST00000325577 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
RAD1-201ENST00000325577 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
RAD1-201ENST00000325577 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
RAD1-201ENST00000325577 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
RAD1-201ENST00000325577 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
RAD1-201ENST00000325577 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
RAD1-201ENST00000325577 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
RAD1-201ENST00000325577 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
RAD1-201ENST00000325577 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
RAD1-201ENST00000325577 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
RAD1-201ENST00000325577 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
RAD1-201ENST00000325577 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
RAD1-201ENST00000325577 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
RAD1-201ENST00000325577 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.591e-7■■■■■ 39.8
RAD1-201ENST00000325577 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
RAD1-201ENST00000325577 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
RAD1-201ENST00000325577 EIF4G3O43432 1585 aaKnown RBP24.92■■□□□ 1.58
RAD1-201ENST00000325577 CUX1P39880 1505 aa24.86■■□□□ 1.57
RAD1-201ENST00000325577 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
RAD1-201ENST00000325577 SOGA1O94964 1423 aa24.82■■□□□ 1.56
RAD1-201ENST00000325577 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
RAD1-201ENST00000325577 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
RAD1-201ENST00000325577 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
RAD1-201ENST00000325577 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
RAD1-201ENST00000325577 CHD1O14646 1710 aa24.72■■□□□ 1.55
RAD1-201ENST00000325577 FBLN2P98095 1184 aa24.67■■□□□ 1.54
RAD1-201ENST00000325577 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
RAD1-201ENST00000325577 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
RAD1-201ENST00000325577 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
RAD1-201ENST00000325577 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
RAD1-201ENST00000325577 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
RAD1-201ENST00000325577 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
RAD1-201ENST00000325577 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
RAD1-201ENST00000325577 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
RAD1-201ENST00000325577 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
RAD1-201ENST00000325577 MAGI1Q96QZ7 1491 aaPredicted RBP24.48■■□□□ 1.51
RAD1-201ENST00000325577 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
RAD1-201ENST00000325577 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
RAD1-201ENST00000325577 CLASP1Q7Z460 1538 aa24.46■■□□□ 1.51
RAD1-201ENST00000325577 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
RAD1-201ENST00000325577 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
RAD1-201ENST00000325577 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
RAD1-201ENST00000325577 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
RAD1-201ENST00000325577 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
RAD1-201ENST00000325577 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
RAD1-201ENST00000325577 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
RAD1-201ENST00000325577 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
RAD1-201ENST00000325577 CEP170Q5SW79 1584 aa24.2■■□□□ 1.47
RAD1-201ENST00000325577 NUP160Q12769 1436 aa24.18■■□□□ 1.46
RAD1-201ENST00000325577 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
RAD1-201ENST00000325577 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
RAD1-201ENST00000325577 TRHP20396 242 aaPredicted RBP24.1■■□□□ 1.45
RAD1-201ENST00000325577 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
RAD1-201ENST00000325577 IGF1RP08069 1367 aa24.03■■□□□ 1.44
RAD1-201ENST00000325577 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
RAD1-201ENST00000325577 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
RAD1-201ENST00000325577 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms