RNA–Protein interactions for RNA: ENST00000320216.10

ITGB2-202, Transcript of integrin subunit beta 2, humanhuman

TSL 5

Gene ITGB2, Length 966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-202ENST00000320216 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
ITGB2-202ENST00000320216 CCDC180Q9P1Z9 1646 aa36.53■■■■□ 3.44
ITGB2-202ENST00000320216 ABCC9O60706 1549 aa36.46■■■■□ 3.43
ITGB2-202ENST00000320216 DCAF8L2P0C7V8 631 aa34.8■■■■□ 3.16
ITGB2-202ENST00000320216 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
ITGB2-202ENST00000320216 NACADO15069 1562 aa34.53■■■■□ 3.12
ITGB2-202ENST00000320216 PABPN1Q86U42 306 aaKnown RBP eCLIP34.1■■■■□ 3.05
ITGB2-202ENST00000320216 MYO15BQ96JP2 1530 aa34.06■■■■□ 3.04
ITGB2-202ENST00000320216 ZCCHC6Q5VYS8 1495 aaKnown RBP33.99■■■■□ 3.03
ITGB2-202ENST00000320216 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
ITGB2-202ENST00000320216 UNC13AQ9UPW8 1703 aa33.91■■■■□ 3.02
ITGB2-202ENST00000320216 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
ITGB2-202ENST00000320216 BICRAQ9NZM4 1560 aa33.68■■■□□ 2.98
ITGB2-202ENST00000320216 SCRIBQ14160 1630 aa33.48■■■□□ 2.95
ITGB2-202ENST00000320216 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
ITGB2-202ENST00000320216 CC2D2AQ9P2K1 1620 aa32.88■■■□□ 2.85
ITGB2-202ENST00000320216 EIF4G1Q04637 1599 aaKnown RBP32.85■■■□□ 2.85
ITGB2-202ENST00000320216 CECR2Q9BXF3 1484 aa32.76■■■□□ 2.84
ITGB2-202ENST00000320216 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
ITGB2-202ENST00000320216 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
ITGB2-202ENST00000320216 ATAD2BQ9ULI0 1458 aa31.88■■■□□ 2.69
ITGB2-202ENST00000320216 BAZ1AQ9NRL2 1556 aaPredicted RBP31.78■■■□□ 2.68
ITGB2-202ENST00000320216 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
ITGB2-202ENST00000320216 HMGXB3Q12766 1538 aa31.63■■■□□ 2.65
ITGB2-202ENST00000320216 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
ITGB2-202ENST00000320216 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
ITGB2-202ENST00000320216 PEG3Q9GZU2 1588 aa31.5■■■□□ 2.63
ITGB2-202ENST00000320216 ERCC6Q03468 1493 aa31.45■■■□□ 2.62
ITGB2-202ENST00000320216 NESP48681 1621 aa31.4■■■□□ 2.62
ITGB2-202ENST00000320216 WIZO95785 1651 aa31.28■■■□□ 2.6
ITGB2-202ENST00000320216 CUX2O14529 1486 aa31.16■■■□□ 2.58
ITGB2-202ENST00000320216 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
ITGB2-202ENST00000320216 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
ITGB2-202ENST00000320216 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
ITGB2-202ENST00000320216 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
ITGB2-202ENST00000320216 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
ITGB2-202ENST00000320216 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
ITGB2-202ENST00000320216 THOC2Q8NI27 1593 aaKnown RBP30.88■■■□□ 2.53
ITGB2-202ENST00000320216 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
ITGB2-202ENST00000320216 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
ITGB2-202ENST00000320216 CFTRP13569 1480 aa30.66■■■□□ 2.5
ITGB2-202ENST00000320216 FANCD2Q9BXW9 1451 aa30.65■■■□□ 2.5
ITGB2-202ENST00000320216 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
ITGB2-202ENST00000320216 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
ITGB2-202ENST00000320216 WDR62O43379 1518 aa30.54■■■□□ 2.48
ITGB2-202ENST00000320216 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
ITGB2-202ENST00000320216 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
ITGB2-202ENST00000320216 SUPT5HO00267 1087 aaKnown RBP30.18■■■□□ 2.42
ITGB2-202ENST00000320216 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
ITGB2-202ENST00000320216 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
ITGB2-202ENST00000320216 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
ITGB2-202ENST00000320216 ZNF608Q9ULD9 1512 aaPredicted RBP29.97■■■□□ 2.39
ITGB2-202ENST00000320216 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
ITGB2-202ENST00000320216 OSCARQ8IYS5 282 aa29.96■■■□□ 2.39
ITGB2-202ENST00000320216 TRIM41Q8WV44 630 aa29.84■■■□□ 2.37
ITGB2-202ENST00000320216 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.36
ITGB2-202ENST00000320216 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
ITGB2-202ENST00000320216 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
ITGB2-202ENST00000320216 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
ITGB2-202ENST00000320216 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
ITGB2-202ENST00000320216 SOGA1O94964 1423 aa29.74■■■□□ 2.35
ITGB2-202ENST00000320216 CUX1P39880 1505 aa29.69■■■□□ 2.34
ITGB2-202ENST00000320216 TDRD9Q8NDG6 1382 aaKnown RBP29.68■■■□□ 2.34
ITGB2-202ENST00000320216 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
ITGB2-202ENST00000320216 FBLN2P98095 1184 aa29.66■■■□□ 2.34
ITGB2-202ENST00000320216 CHD1O14646 1710 aa29.49■■■□□ 2.31
ITGB2-202ENST00000320216 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
ITGB2-202ENST00000320216 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
ITGB2-202ENST00000320216 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
ITGB2-202ENST00000320216 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
ITGB2-202ENST00000320216 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
ITGB2-202ENST00000320216 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
ITGB2-202ENST00000320216 WDR97A6NE52 1622 aa29.38■■■□□ 2.29
ITGB2-202ENST00000320216 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
ITGB2-202ENST00000320216 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
ITGB2-202ENST00000320216 WRNQ14191 1432 aaPredicted RBP eCLIP29.34■■■□□ 2.29
ITGB2-202ENST00000320216 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
ITGB2-202ENST00000320216 MAGI1Q96QZ7 1491 aaPredicted RBP29.3■■■□□ 2.28
ITGB2-202ENST00000320216 CYB5RLQ6IPT4 315 aa29.3■■■□□ 2.28
ITGB2-202ENST00000320216 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
ITGB2-202ENST00000320216 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
ITGB2-202ENST00000320216 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
ITGB2-202ENST00000320216 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
ITGB2-202ENST00000320216 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
ITGB2-202ENST00000320216 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.27
ITGB2-202ENST00000320216 CLASP1Q7Z460 1538 aa29.11■■■□□ 2.25
ITGB2-202ENST00000320216 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
ITGB2-202ENST00000320216 GRIN2AQ12879 1464 aa28.99■■■□□ 2.23
ITGB2-202ENST00000320216 ADAMTS12P58397 1594 aa28.97■■■□□ 2.23
ITGB2-202ENST00000320216 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
ITGB2-202ENST00000320216 ERICH3Q5RHP9 1530 aa28.93■■■□□ 2.22
ITGB2-202ENST00000320216 TRHP20396 242 aaPredicted RBP28.92■■■□□ 2.22
ITGB2-202ENST00000320216 CEP170Q5SW79 1584 aa28.88■■■□□ 2.21
ITGB2-202ENST00000320216 NUP160Q12769 1436 aa28.85■■■□□ 2.21
ITGB2-202ENST00000320216 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
ITGB2-202ENST00000320216 KIF27Q86VH2 1401 aa28.77■■■□□ 2.2
ITGB2-202ENST00000320216 IGF1RP08069 1367 aa28.75■■■□□ 2.19
ITGB2-202ENST00000320216 JPH4Q96JJ6 628 aa28.71■■■□□ 2.19
ITGB2-202ENST00000320216 PRG4Q92954 1404 aaPredicted RBP28.65■■■□□ 2.18
ITGB2-202ENST00000320216 SHROOM2Q13796 1616 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms