RNA–Protein interactions for RNA: ENST00000316634.5

SNAPC5-202, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNAPC5, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-202ENST00000316634 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
SNAPC5-202ENST00000316634 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
SNAPC5-202ENST00000316634 ABCC9O60706 1549 aa25.77■■□□□ 1.72
SNAPC5-202ENST00000316634 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
SNAPC5-202ENST00000316634 NACADO15069 1562 aa24.57■■□□□ 1.52
SNAPC5-202ENST00000316634 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
SNAPC5-202ENST00000316634 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
SNAPC5-202ENST00000316634 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
SNAPC5-202ENST00000316634 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
SNAPC5-202ENST00000316634 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
SNAPC5-202ENST00000316634 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
SNAPC5-202ENST00000316634 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
SNAPC5-202ENST00000316634 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
SNAPC5-202ENST00000316634 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
SNAPC5-202ENST00000316634 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
SNAPC5-202ENST00000316634 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
SNAPC5-202ENST00000316634 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
SNAPC5-202ENST00000316634 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
SNAPC5-202ENST00000316634 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
SNAPC5-202ENST00000316634 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
SNAPC5-202ENST00000316634 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
SNAPC5-202ENST00000316634 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
SNAPC5-202ENST00000316634 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
SNAPC5-202ENST00000316634 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
SNAPC5-202ENST00000316634 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
SNAPC5-202ENST00000316634 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
SNAPC5-202ENST00000316634 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
SNAPC5-202ENST00000316634 WIZO95785 1651 aa22.23■■□□□ 1.15
SNAPC5-202ENST00000316634 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
SNAPC5-202ENST00000316634 NESP48681 1621 aa22.21■■□□□ 1.15
SNAPC5-202ENST00000316634 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.14
SNAPC5-202ENST00000316634 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
SNAPC5-202ENST00000316634 CUX2O14529 1486 aa22.08■■□□□ 1.12
SNAPC5-202ENST00000316634 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
SNAPC5-202ENST00000316634 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
SNAPC5-202ENST00000316634 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
SNAPC5-202ENST00000316634 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
SNAPC5-202ENST00000316634 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
SNAPC5-202ENST00000316634 CFTRP13569 1480 aa21.82■■□□□ 1.08
SNAPC5-202ENST00000316634 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
SNAPC5-202ENST00000316634 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
SNAPC5-202ENST00000316634 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
SNAPC5-202ENST00000316634 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
SNAPC5-202ENST00000316634 DNAJC5Q9H3Z4 198 aa21.73■■□□□ 1.07
SNAPC5-202ENST00000316634 WDR62O43379 1518 aa21.7■■□□□ 1.07
SNAPC5-202ENST00000316634 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
SNAPC5-202ENST00000316634 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
SNAPC5-202ENST00000316634 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
SNAPC5-202ENST00000316634 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
SNAPC5-202ENST00000316634 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
SNAPC5-202ENST00000316634 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
SNAPC5-202ENST00000316634 IFT140Q96RY7 1462 aa21.32■■□□□ 1
SNAPC5-202ENST00000316634 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
SNAPC5-202ENST00000316634 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
SNAPC5-202ENST00000316634 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
SNAPC5-202ENST00000316634 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
SNAPC5-202ENST00000316634 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
SNAPC5-202ENST00000316634 CUX1P39880 1505 aa21.1■□□□□ 0.97
SNAPC5-202ENST00000316634 SOGA1O94964 1423 aa21.1■□□□□ 0.97
SNAPC5-202ENST00000316634 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
SNAPC5-202ENST00000316634 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
SNAPC5-202ENST00000316634 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.97
SNAPC5-202ENST00000316634 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
SNAPC5-202ENST00000316634 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
SNAPC5-202ENST00000316634 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
SNAPC5-202ENST00000316634 CHD1O14646 1710 aa20.9■□□□□ 0.94
SNAPC5-202ENST00000316634 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
SNAPC5-202ENST00000316634 FBLN2P98095 1184 aa20.9■□□□□ 0.94
SNAPC5-202ENST00000316634 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
SNAPC5-202ENST00000316634 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
SNAPC5-202ENST00000316634 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
SNAPC5-202ENST00000316634 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
SNAPC5-202ENST00000316634 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
SNAPC5-202ENST00000316634 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
SNAPC5-202ENST00000316634 GAPVD1Q14C86 1478 aa20.84■□□□□ 0.93
SNAPC5-202ENST00000316634 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
SNAPC5-202ENST00000316634 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
SNAPC5-202ENST00000316634 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
SNAPC5-202ENST00000316634 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
SNAPC5-202ENST00000316634 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
SNAPC5-202ENST00000316634 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
SNAPC5-202ENST00000316634 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
SNAPC5-202ENST00000316634 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
SNAPC5-202ENST00000316634 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
SNAPC5-202ENST00000316634 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
SNAPC5-202ENST00000316634 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
SNAPC5-202ENST00000316634 CYB5RLQ6IPT4 315 aa20.63■□□□□ 0.89
SNAPC5-202ENST00000316634 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
SNAPC5-202ENST00000316634 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
SNAPC5-202ENST00000316634 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
SNAPC5-202ENST00000316634 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
SNAPC5-202ENST00000316634 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
SNAPC5-202ENST00000316634 NUP160Q12769 1436 aa20.53■□□□□ 0.88
SNAPC5-202ENST00000316634 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
SNAPC5-202ENST00000316634 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
SNAPC5-202ENST00000316634 IGF1RP08069 1367 aa20.43■□□□□ 0.86
SNAPC5-202ENST00000316634 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
SNAPC5-202ENST00000316634 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
SNAPC5-202ENST00000316634 CUL7Q14999 1698 aa20.37■□□□□ 0.85
SNAPC5-202ENST00000316634 JPH4Q96JJ6 628 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms