RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
TARDBP-202ENST00000315091 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
TARDBP-202ENST00000315091 ZCCHC6Q5VYS8 1495 aaKnown RBP23.78■■□□□ 1.4
TARDBP-202ENST00000315091 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
TARDBP-202ENST00000315091 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
TARDBP-202ENST00000315091 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
TARDBP-202ENST00000315091 ABCC9O60706 1549 aa23.12■■□□□ 1.29
TARDBP-202ENST00000315091 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
TARDBP-202ENST00000315091 NACADO15069 1562 aa22.84■■□□□ 1.25
TARDBP-202ENST00000315091 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
TARDBP-202ENST00000315091 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
TARDBP-202ENST00000315091 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
TARDBP-202ENST00000315091 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
TARDBP-202ENST00000315091 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.11
TARDBP-202ENST00000315091 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
TARDBP-202ENST00000315091 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
TARDBP-202ENST00000315091 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
TARDBP-202ENST00000315091 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
TARDBP-202ENST00000315091 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
TARDBP-202ENST00000315091 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
TARDBP-202ENST00000315091 WIZO95785 1651 aa21.65■■□□□ 1.06
TARDBP-202ENST00000315091 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
TARDBP-202ENST00000315091 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
TARDBP-202ENST00000315091 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
TARDBP-202ENST00000315091 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
TARDBP-202ENST00000315091 SMARCA2P51531 1590 aa21.27■■□□□ 1
TARDBP-202ENST00000315091 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
TARDBP-202ENST00000315091 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
TARDBP-202ENST00000315091 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
TARDBP-202ENST00000315091 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
TARDBP-202ENST00000315091 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
TARDBP-202ENST00000315091 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
TARDBP-202ENST00000315091 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
TARDBP-202ENST00000315091 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
TARDBP-202ENST00000315091 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
TARDBP-202ENST00000315091 CFTRP13569 1480 aa20.69■□□□□ 0.9
TARDBP-202ENST00000315091 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
TARDBP-202ENST00000315091 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
TARDBP-202ENST00000315091 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
TARDBP-202ENST00000315091 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
TARDBP-202ENST00000315091 SOGA1O94964 1423 aa20.5■□□□□ 0.87
TARDBP-202ENST00000315091 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
TARDBP-202ENST00000315091 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
TARDBP-202ENST00000315091 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
TARDBP-202ENST00000315091 EEA1Q15075 1411 aa20.45■□□□□ 0.86
TARDBP-202ENST00000315091 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
TARDBP-202ENST00000315091 CUX1P39880 1505 aa20.43■□□□□ 0.86
TARDBP-202ENST00000315091 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
TARDBP-202ENST00000315091 NESP48681 1621 aa20.36■□□□□ 0.85
TARDBP-202ENST00000315091 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
TARDBP-202ENST00000315091 FANCD2Q9BXW9 1451 aa20.35■□□□□ 0.85
TARDBP-202ENST00000315091 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.84
TARDBP-202ENST00000315091 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
TARDBP-202ENST00000315091 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
TARDBP-202ENST00000315091 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
TARDBP-202ENST00000315091 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
TARDBP-202ENST00000315091 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
TARDBP-202ENST00000315091 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
TARDBP-202ENST00000315091 KIF21BO75037 1637 aa20.16■□□□□ 0.82
TARDBP-202ENST00000315091 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
TARDBP-202ENST00000315091 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
TARDBP-202ENST00000315091 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
TARDBP-202ENST00000315091 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
TARDBP-202ENST00000315091 PRXQ9BXM0 1461 aa20.07■□□□□ 0.8
TARDBP-202ENST00000315091 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
TARDBP-202ENST00000315091 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
TARDBP-202ENST00000315091 CUX2O14529 1486 aa20.06■□□□□ 0.8
TARDBP-202ENST00000315091 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
TARDBP-202ENST00000315091 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
TARDBP-202ENST00000315091 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
TARDBP-202ENST00000315091 ERICH3Q5RHP9 1530 aa20.01■□□□□ 0.79
TARDBP-202ENST00000315091 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
TARDBP-202ENST00000315091 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
TARDBP-202ENST00000315091 IGF1RP08069 1367 aa20■□□□□ 0.79
TARDBP-202ENST00000315091 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
TARDBP-202ENST00000315091 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
TARDBP-202ENST00000315091 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
TARDBP-202ENST00000315091 CLIP1P30622 1438 aa19.86■□□□□ 0.77
TARDBP-202ENST00000315091 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
TARDBP-202ENST00000315091 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
TARDBP-202ENST00000315091 WDR62O43379 1518 aa19.81■□□□□ 0.76
TARDBP-202ENST00000315091 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
TARDBP-202ENST00000315091 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
TARDBP-202ENST00000315091 TRIM26Q12899 539 aaPredicted RBP19.8■□□□□ 0.76
TARDBP-202ENST00000315091 ERCC6Q03468 1493 aa19.78■□□□□ 0.76
TARDBP-202ENST00000315091 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.75
TARDBP-202ENST00000315091 CUL7Q14999 1698 aa19.74■□□□□ 0.75
TARDBP-202ENST00000315091 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
TARDBP-202ENST00000315091 VPS8Q8N3P4 1428 aa19.71■□□□□ 0.75
TARDBP-202ENST00000315091 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
TARDBP-202ENST00000315091 RANGAP1P46060 587 aaPredicted RBP19.7■□□□□ 0.74
TARDBP-202ENST00000315091 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
TARDBP-202ENST00000315091 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
TARDBP-202ENST00000315091 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.742e-7■■□□□ 14.3
TARDBP-202ENST00000315091 ARHGAP35Q9NRY4 1499 aa19.64■□□□□ 0.73
TARDBP-202ENST00000315091 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-202ENST00000315091 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
TARDBP-202ENST00000315091 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
TARDBP-202ENST00000315091 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
TARDBP-202ENST00000315091 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms