RNA–Protein interactions for RNA: ENST00000314103.5

CHAF1B-201, Transcript of chromatin assembly factor 1 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1B, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1B-201ENST00000314103 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
CHAF1B-201ENST00000314103 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
CHAF1B-201ENST00000314103 ABCC9O60706 1549 aa16.65■□□□□ 0.26
CHAF1B-201ENST00000314103 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
CHAF1B-201ENST00000314103 NACADO15069 1562 aa16.04■□□□□ 0.16
CHAF1B-201ENST00000314103 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.16
CHAF1B-201ENST00000314103 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.15
CHAF1B-201ENST00000314103 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
CHAF1B-201ENST00000314103 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
CHAF1B-201ENST00000314103 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
CHAF1B-201ENST00000314103 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
CHAF1B-201ENST00000314103 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
CHAF1B-201ENST00000314103 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHAF1B-201ENST00000314103 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
CHAF1B-201ENST00000314103 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
CHAF1B-201ENST00000314103 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
CHAF1B-201ENST00000314103 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
CHAF1B-201ENST00000314103 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
CHAF1B-201ENST00000314103 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
CHAF1B-201ENST00000314103 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
CHAF1B-201ENST00000314103 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
CHAF1B-201ENST00000314103 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
CHAF1B-201ENST00000314103 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
CHAF1B-201ENST00000314103 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.03
CHAF1B-201ENST00000314103 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
CHAF1B-201ENST00000314103 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
CHAF1B-201ENST00000314103 WIZO95785 1651 aa14.71□□□□□ -0.06
CHAF1B-201ENST00000314103 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
CHAF1B-201ENST00000314103 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
CHAF1B-201ENST00000314103 NESP48681 1621 aa14.51□□□□□ -0.09
CHAF1B-201ENST00000314103 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
CHAF1B-201ENST00000314103 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
CHAF1B-201ENST00000314103 KIF21AQ7Z4S6 1674 aa14.37□□□□□ -0.11
CHAF1B-201ENST00000314103 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
CHAF1B-201ENST00000314103 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
CHAF1B-201ENST00000314103 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
CHAF1B-201ENST00000314103 CFTRP13569 1480 aa14.32□□□□□ -0.12
CHAF1B-201ENST00000314103 PRDM2Q13029 1718 aa14.27□□□□□ -0.12
CHAF1B-201ENST00000314103 CUX2O14529 1486 aa14.21□□□□□ -0.13
CHAF1B-201ENST00000314103 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
CHAF1B-201ENST00000314103 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
CHAF1B-201ENST00000314103 WDR62O43379 1518 aa14.19□□□□□ -0.14
CHAF1B-201ENST00000314103 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
CHAF1B-201ENST00000314103 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
CHAF1B-201ENST00000314103 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
CHAF1B-201ENST00000314103 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
CHAF1B-201ENST00000314103 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
CHAF1B-201ENST00000314103 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
CHAF1B-201ENST00000314103 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
CHAF1B-201ENST00000314103 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
CHAF1B-201ENST00000314103 CUX1P39880 1505 aa13.94□□□□□ -0.18
CHAF1B-201ENST00000314103 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
CHAF1B-201ENST00000314103 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
CHAF1B-201ENST00000314103 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
CHAF1B-201ENST00000314103 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
CHAF1B-201ENST00000314103 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
CHAF1B-201ENST00000314103 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
CHAF1B-201ENST00000314103 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
CHAF1B-201ENST00000314103 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
CHAF1B-201ENST00000314103 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
CHAF1B-201ENST00000314103 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
CHAF1B-201ENST00000314103 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
CHAF1B-201ENST00000314103 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
CHAF1B-201ENST00000314103 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■■ 33.2
CHAF1B-201ENST00000314103 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
CHAF1B-201ENST00000314103 SOGA1O94964 1423 aa13.72□□□□□ -0.21
CHAF1B-201ENST00000314103 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
CHAF1B-201ENST00000314103 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
CHAF1B-201ENST00000314103 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
CHAF1B-201ENST00000314103 CHD1O14646 1710 aa13.66□□□□□ -0.22
CHAF1B-201ENST00000314103 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
CHAF1B-201ENST00000314103 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
CHAF1B-201ENST00000314103 GAPVD1Q14C86 1478 aa13.58□□□□□ -0.24
CHAF1B-201ENST00000314103 GRIN2BQ13224 1484 aa13.57□□□□□ -0.24
CHAF1B-201ENST00000314103 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
CHAF1B-201ENST00000314103 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
CHAF1B-201ENST00000314103 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
CHAF1B-201ENST00000314103 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
CHAF1B-201ENST00000314103 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
CHAF1B-201ENST00000314103 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
CHAF1B-201ENST00000314103 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
CHAF1B-201ENST00000314103 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
CHAF1B-201ENST00000314103 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
CHAF1B-201ENST00000314103 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
CHAF1B-201ENST00000314103 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
CHAF1B-201ENST00000314103 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
CHAF1B-201ENST00000314103 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
CHAF1B-201ENST00000314103 IGF1RP08069 1367 aa13.44□□□□□ -0.26
CHAF1B-201ENST00000314103 NUP160Q12769 1436 aa13.43□□□□□ -0.26
CHAF1B-201ENST00000314103 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
CHAF1B-201ENST00000314103 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
CHAF1B-201ENST00000314103 ERCC6L2Q5T890 1561 aa13.39□□□□□ -0.27
CHAF1B-201ENST00000314103 CUL7Q14999 1698 aa13.37□□□□□ -0.27
CHAF1B-201ENST00000314103 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
CHAF1B-201ENST00000314103 KIF27Q86VH2 1401 aa13.35□□□□□ -0.27
CHAF1B-201ENST00000314103 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
CHAF1B-201ENST00000314103 FBLN2P98095 1184 aa13.31□□□□□ -0.28
CHAF1B-201ENST00000314103 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
CHAF1B-201ENST00000314103 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
CHAF1B-201ENST00000314103 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms