RNA–Protein interactions for RNA: ENST00000314067.10

IFT43-202, Transcript of intraflagellar transport 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IFT43, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-202ENST00000314067 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
IFT43-202ENST00000314067 ABCC9O60706 1549 aa26.29■■□□□ 1.8
IFT43-202ENST00000314067 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
IFT43-202ENST00000314067 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
IFT43-202ENST00000314067 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
IFT43-202ENST00000314067 NACADO15069 1562 aa24.77■■□□□ 1.56
IFT43-202ENST00000314067 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
IFT43-202ENST00000314067 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
IFT43-202ENST00000314067 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
IFT43-202ENST00000314067 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
IFT43-202ENST00000314067 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
IFT43-202ENST00000314067 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
IFT43-202ENST00000314067 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
IFT43-202ENST00000314067 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
IFT43-202ENST00000314067 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
IFT43-202ENST00000314067 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
IFT43-202ENST00000314067 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
IFT43-202ENST00000314067 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
IFT43-202ENST00000314067 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
IFT43-202ENST00000314067 NCAPD3P42695 1498 aa22.94■■□□□ 1.26
IFT43-202ENST00000314067 CUX2O14529 1486 aa22.89■■□□□ 1.25
IFT43-202ENST00000314067 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
IFT43-202ENST00000314067 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
IFT43-202ENST00000314067 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
IFT43-202ENST00000314067 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
IFT43-202ENST00000314067 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
IFT43-202ENST00000314067 NESP48681 1621 aa22.56■■□□□ 1.2
IFT43-202ENST00000314067 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
IFT43-202ENST00000314067 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
IFT43-202ENST00000314067 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
IFT43-202ENST00000314067 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
IFT43-202ENST00000314067 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
IFT43-202ENST00000314067 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
IFT43-202ENST00000314067 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
IFT43-202ENST00000314067 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
IFT43-202ENST00000314067 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
IFT43-202ENST00000314067 WIZO95785 1651 aa22.15■■□□□ 1.14
IFT43-202ENST00000314067 WDR62O43379 1518 aa22.06■■□□□ 1.12
IFT43-202ENST00000314067 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
IFT43-202ENST00000314067 CFTRP13569 1480 aa21.89■■□□□ 1.09
IFT43-202ENST00000314067 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
IFT43-202ENST00000314067 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
IFT43-202ENST00000314067 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
IFT43-202ENST00000314067 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
IFT43-202ENST00000314067 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
IFT43-202ENST00000314067 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
IFT43-202ENST00000314067 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
IFT43-202ENST00000314067 OSCARQ8IYS5 282 aa21.73■■□□□ 1.07
IFT43-202ENST00000314067 CCDC88BA6NC98 1476 aa21.53■■□□□ 1.04
IFT43-202ENST00000314067 ZNF608Q9ULD9 1512 aaPredicted RBP21.5■■□□□ 1.03
IFT43-202ENST00000314067 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
IFT43-202ENST00000314067 RIMBP3CA6NJZ7 1639 aa21.48■■□□□ 1.03
IFT43-202ENST00000314067 RIMBP3BA6NNM3 1639 aa21.48■■□□□ 1.03
IFT43-202ENST00000314067 RIMBP3Q9UFD9 1639 aa21.48■■□□□ 1.03
IFT43-202ENST00000314067 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
IFT43-202ENST00000314067 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
IFT43-202ENST00000314067 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
IFT43-202ENST00000314067 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
IFT43-202ENST00000314067 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
IFT43-202ENST00000314067 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
IFT43-202ENST00000314067 CHD1O14646 1710 aa21.27■■□□□ 1
IFT43-202ENST00000314067 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.99
IFT43-202ENST00000314067 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
IFT43-202ENST00000314067 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
IFT43-202ENST00000314067 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
IFT43-202ENST00000314067 FBLN2P98095 1184 aa21.11■□□□□ 0.97
IFT43-202ENST00000314067 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
IFT43-202ENST00000314067 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
IFT43-202ENST00000314067 SOGA1O94964 1423 aa21.06■□□□□ 0.96
IFT43-202ENST00000314067 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
IFT43-202ENST00000314067 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
IFT43-202ENST00000314067 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
IFT43-202ENST00000314067 CUX1P39880 1505 aa21■□□□□ 0.95
IFT43-202ENST00000314067 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
IFT43-202ENST00000314067 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
IFT43-202ENST00000314067 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
IFT43-202ENST00000314067 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
IFT43-202ENST00000314067 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
IFT43-202ENST00000314067 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
IFT43-202ENST00000314067 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
IFT43-202ENST00000314067 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
IFT43-202ENST00000314067 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
IFT43-202ENST00000314067 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
IFT43-202ENST00000314067 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
IFT43-202ENST00000314067 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
IFT43-202ENST00000314067 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
IFT43-202ENST00000314067 NUP160Q12769 1436 aa20.69■□□□□ 0.9
IFT43-202ENST00000314067 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
IFT43-202ENST00000314067 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
IFT43-202ENST00000314067 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
IFT43-202ENST00000314067 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
IFT43-202ENST00000314067 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
IFT43-202ENST00000314067 SHROOM2Q13796 1616 aa20.61■□□□□ 0.89
IFT43-202ENST00000314067 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
IFT43-202ENST00000314067 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
IFT43-202ENST00000314067 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.87
IFT43-202ENST00000314067 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
IFT43-202ENST00000314067 KIF13AQ9H1H9 1805 aa20.43■□□□□ 0.86
IFT43-202ENST00000314067 PRG4Q92954 1404 aaPredicted RBP20.39■□□□□ 0.85
IFT43-202ENST00000314067 JPH4Q96JJ6 628 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms