RNA–Protein interactions for RNA: ENST00000313350.10

CLASP2-201, Transcript of cytoplasmic linker associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLASP2, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-201ENST00000313350 NISCHQ9Y2I1 1504 aa29.43■■■□□ 2.3
CLASP2-201ENST00000313350 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
CLASP2-201ENST00000313350 ABCC9O60706 1549 aa25.64■■□□□ 1.7
CLASP2-201ENST00000313350 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
CLASP2-201ENST00000313350 NACADO15069 1562 aa24.62■■□□□ 1.53
CLASP2-201ENST00000313350 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
CLASP2-201ENST00000313350 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
CLASP2-201ENST00000313350 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
CLASP2-201ENST00000313350 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
CLASP2-201ENST00000313350 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
CLASP2-201ENST00000313350 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
CLASP2-201ENST00000313350 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
CLASP2-201ENST00000313350 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
CLASP2-201ENST00000313350 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
CLASP2-201ENST00000313350 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
CLASP2-201ENST00000313350 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
CLASP2-201ENST00000313350 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
CLASP2-201ENST00000313350 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
CLASP2-201ENST00000313350 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
CLASP2-201ENST00000313350 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
CLASP2-201ENST00000313350 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
CLASP2-201ENST00000313350 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
CLASP2-201ENST00000313350 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
CLASP2-201ENST00000313350 PEG3Q9GZU2 1588 aa22.68■■□□□ 1.22
CLASP2-201ENST00000313350 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
CLASP2-201ENST00000313350 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
CLASP2-201ENST00000313350 WIZO95785 1651 aa22.5■■□□□ 1.19
CLASP2-201ENST00000313350 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
CLASP2-201ENST00000313350 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
CLASP2-201ENST00000313350 NESP48681 1621 aa22.23■■□□□ 1.15
CLASP2-201ENST00000313350 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
CLASP2-201ENST00000313350 LAMC3Q9Y6N6 1575 aa22.14■■□□□ 1.14
CLASP2-201ENST00000313350 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
CLASP2-201ENST00000313350 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
CLASP2-201ENST00000313350 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
CLASP2-201ENST00000313350 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
CLASP2-201ENST00000313350 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
CLASP2-201ENST00000313350 CFTRP13569 1480 aa21.92■■□□□ 1.1
CLASP2-201ENST00000313350 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
CLASP2-201ENST00000313350 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
CLASP2-201ENST00000313350 CUX2O14529 1486 aa21.88■■□□□ 1.09
CLASP2-201ENST00000313350 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
CLASP2-201ENST00000313350 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
CLASP2-201ENST00000313350 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
CLASP2-201ENST00000313350 WDR62O43379 1518 aa21.73■■□□□ 1.07
CLASP2-201ENST00000313350 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
CLASP2-201ENST00000313350 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
CLASP2-201ENST00000313350 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
CLASP2-201ENST00000313350 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
CLASP2-201ENST00000313350 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
CLASP2-201ENST00000313350 CUX1P39880 1505 aa21.31■■□□□ 1
CLASP2-201ENST00000313350 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
CLASP2-201ENST00000313350 IFT140Q96RY7 1462 aa21.28■■□□□ 1
CLASP2-201ENST00000313350 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
CLASP2-201ENST00000313350 ZNF608Q9ULD9 1512 aaPredicted RBP21.26■□□□□ 0.99
CLASP2-201ENST00000313350 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
CLASP2-201ENST00000313350 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
CLASP2-201ENST00000313350 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
CLASP2-201ENST00000313350 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
CLASP2-201ENST00000313350 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
CLASP2-201ENST00000313350 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
CLASP2-201ENST00000313350 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.97
CLASP2-201ENST00000313350 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
CLASP2-201ENST00000313350 SOGA1O94964 1423 aa21.11■□□□□ 0.97
CLASP2-201ENST00000313350 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
CLASP2-201ENST00000313350 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.974e-6■■■■■ 31
CLASP2-201ENST00000313350 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
CLASP2-201ENST00000313350 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
CLASP2-201ENST00000313350 CHD1O14646 1710 aa21■□□□□ 0.95
CLASP2-201ENST00000313350 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
CLASP2-201ENST00000313350 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
CLASP2-201ENST00000313350 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
CLASP2-201ENST00000313350 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
CLASP2-201ENST00000313350 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
CLASP2-201ENST00000313350 GRIN2BQ13224 1484 aa20.89■□□□□ 0.93
CLASP2-201ENST00000313350 OSCARQ8IYS5 282 aa20.89■□□□□ 0.93
CLASP2-201ENST00000313350 MAGI1Q96QZ7 1491 aaPredicted RBP20.85■□□□□ 0.93
CLASP2-201ENST00000313350 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
CLASP2-201ENST00000313350 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
CLASP2-201ENST00000313350 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
CLASP2-201ENST00000313350 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
CLASP2-201ENST00000313350 FBLN2P98095 1184 aa20.72■□□□□ 0.91
CLASP2-201ENST00000313350 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
CLASP2-201ENST00000313350 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
CLASP2-201ENST00000313350 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
CLASP2-201ENST00000313350 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
CLASP2-201ENST00000313350 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
CLASP2-201ENST00000313350 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
CLASP2-201ENST00000313350 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
CLASP2-201ENST00000313350 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
CLASP2-201ENST00000313350 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
CLASP2-201ENST00000313350 NUP160Q12769 1436 aa20.58■□□□□ 0.89
CLASP2-201ENST00000313350 IGF1RP08069 1367 aa20.57■□□□□ 0.88
CLASP2-201ENST00000313350 CUL7Q14999 1698 aa20.56■□□□□ 0.88
CLASP2-201ENST00000313350 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
CLASP2-201ENST00000313350 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
CLASP2-201ENST00000313350 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
CLASP2-201ENST00000313350 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
CLASP2-201ENST00000313350 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
CLASP2-201ENST00000313350 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms