RNA–Protein interactions for RNA: ENST00000310027.9

C1orf61-201, Transcript of chromosome 1 open reading frame 61, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C1orf61, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-201ENST00000310027 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
C1orf61-201ENST00000310027 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
C1orf61-201ENST00000310027 ABCC9O60706 1549 aa18.46■□□□□ 0.55
C1orf61-201ENST00000310027 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
C1orf61-201ENST00000310027 NACADO15069 1562 aa17.57■□□□□ 0.4
C1orf61-201ENST00000310027 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
C1orf61-201ENST00000310027 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
C1orf61-201ENST00000310027 ZCCHC6Q5VYS8 1495 aaKnown RBP17.27■□□□□ 0.36
C1orf61-201ENST00000310027 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
C1orf61-201ENST00000310027 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
C1orf61-201ENST00000310027 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
C1orf61-201ENST00000310027 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
C1orf61-201ENST00000310027 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
C1orf61-201ENST00000310027 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
C1orf61-201ENST00000310027 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
C1orf61-201ENST00000310027 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
C1orf61-201ENST00000310027 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
C1orf61-201ENST00000310027 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
C1orf61-201ENST00000310027 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
C1orf61-201ENST00000310027 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
C1orf61-201ENST00000310027 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
C1orf61-201ENST00000310027 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
C1orf61-201ENST00000310027 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
C1orf61-201ENST00000310027 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
C1orf61-201ENST00000310027 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
C1orf61-201ENST00000310027 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
C1orf61-201ENST00000310027 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
C1orf61-201ENST00000310027 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
C1orf61-201ENST00000310027 NESP48681 1621 aa15.89■□□□□ 0.13
C1orf61-201ENST00000310027 CUX2O14529 1486 aa15.87■□□□□ 0.13
C1orf61-201ENST00000310027 WIZO95785 1651 aa15.83■□□□□ 0.13
C1orf61-201ENST00000310027 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
C1orf61-201ENST00000310027 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
C1orf61-201ENST00000310027 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
C1orf61-201ENST00000310027 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
C1orf61-201ENST00000310027 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
C1orf61-201ENST00000310027 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
C1orf61-201ENST00000310027 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
C1orf61-201ENST00000310027 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
C1orf61-201ENST00000310027 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
C1orf61-201ENST00000310027 CFTRP13569 1480 aa15.58■□□□□ 0.08
C1orf61-201ENST00000310027 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
C1orf61-201ENST00000310027 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
C1orf61-201ENST00000310027 WDR62O43379 1518 aa15.53■□□□□ 0.08
C1orf61-201ENST00000310027 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
C1orf61-201ENST00000310027 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
C1orf61-201ENST00000310027 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
C1orf61-201ENST00000310027 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
C1orf61-201ENST00000310027 TOPBP1Q92547 1522 aa15.27■□□□□ 0.03
C1orf61-201ENST00000310027 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
C1orf61-201ENST00000310027 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
C1orf61-201ENST00000310027 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
C1orf61-201ENST00000310027 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
C1orf61-201ENST00000310027 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
C1orf61-201ENST00000310027 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
C1orf61-201ENST00000310027 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
C1orf61-201ENST00000310027 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
C1orf61-201ENST00000310027 TRIM41Q8WV44 630 aa15.08■□□□□ 0
C1orf61-201ENST00000310027 SOGA1O94964 1423 aa15.08■□□□□ 0
C1orf61-201ENST00000310027 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
C1orf61-201ENST00000310027 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
C1orf61-201ENST00000310027 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
C1orf61-201ENST00000310027 CUX1P39880 1505 aa15.04■□□□□ -0
C1orf61-201ENST00000310027 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
C1orf61-201ENST00000310027 WDR97A6NE52 1622 aa15□□□□□ -0.01
C1orf61-201ENST00000310027 FBLN2P98095 1184 aa14.99□□□□□ -0.01
C1orf61-201ENST00000310027 CHD1O14646 1710 aa14.97□□□□□ -0.01
C1orf61-201ENST00000310027 RIMBP3CA6NJZ7 1639 aa14.94□□□□□ -0.02
C1orf61-201ENST00000310027 RIMBP3BA6NNM3 1639 aa14.94□□□□□ -0.02
C1orf61-201ENST00000310027 RIMBP3Q9UFD9 1639 aa14.94□□□□□ -0.02
C1orf61-201ENST00000310027 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
C1orf61-201ENST00000310027 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
C1orf61-201ENST00000310027 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
C1orf61-201ENST00000310027 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
C1orf61-201ENST00000310027 ARHGEF11O15085 1522 aa14.91□□□□□ -0.02
C1orf61-201ENST00000310027 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
C1orf61-201ENST00000310027 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
C1orf61-201ENST00000310027 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
C1orf61-201ENST00000310027 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
C1orf61-201ENST00000310027 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
C1orf61-201ENST00000310027 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
C1orf61-201ENST00000310027 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
C1orf61-201ENST00000310027 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
C1orf61-201ENST00000310027 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
C1orf61-201ENST00000310027 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.04
C1orf61-201ENST00000310027 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
C1orf61-201ENST00000310027 ARAP1Q96P48 1450 aa14.77□□□□□ -0.04
C1orf61-201ENST00000310027 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
C1orf61-201ENST00000310027 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
C1orf61-201ENST00000310027 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
C1orf61-201ENST00000310027 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
C1orf61-201ENST00000310027 NUP160Q12769 1436 aa14.66□□□□□ -0.06
C1orf61-201ENST00000310027 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
C1orf61-201ENST00000310027 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
C1orf61-201ENST00000310027 KIF27Q86VH2 1401 aa14.6□□□□□ -0.07
C1orf61-201ENST00000310027 SHROOM2Q13796 1616 aa14.56□□□□□ -0.08
C1orf61-201ENST00000310027 IGF1RP08069 1367 aa14.56□□□□□ -0.08
C1orf61-201ENST00000310027 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
C1orf61-201ENST00000310027 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
C1orf61-201ENST00000310027 CUL7Q14999 1698 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms