RNA–Protein interactions for RNA: ENST00000309894.5

CSHL1-202, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSHL1, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-202ENST00000309894 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
CSHL1-202ENST00000309894 ABCC9O60706 1549 aa21.43■■□□□ 1.02
CSHL1-202ENST00000309894 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
CSHL1-202ENST00000309894 CCDC180Q9P1Z9 1646 aa20.73■□□□□ 0.91
CSHL1-202ENST00000309894 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
CSHL1-202ENST00000309894 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.78
CSHL1-202ENST00000309894 NACADO15069 1562 aa19.82■□□□□ 0.76
CSHL1-202ENST00000309894 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
CSHL1-202ENST00000309894 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
CSHL1-202ENST00000309894 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
CSHL1-202ENST00000309894 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
CSHL1-202ENST00000309894 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
CSHL1-202ENST00000309894 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
CSHL1-202ENST00000309894 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
CSHL1-202ENST00000309894 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
CSHL1-202ENST00000309894 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
CSHL1-202ENST00000309894 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
CSHL1-202ENST00000309894 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
CSHL1-202ENST00000309894 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
CSHL1-202ENST00000309894 CUX2O14529 1486 aa18.72■□□□□ 0.59
CSHL1-202ENST00000309894 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
CSHL1-202ENST00000309894 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
CSHL1-202ENST00000309894 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
CSHL1-202ENST00000309894 NESP48681 1621 aa18.23■□□□□ 0.51
CSHL1-202ENST00000309894 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
CSHL1-202ENST00000309894 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
CSHL1-202ENST00000309894 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
CSHL1-202ENST00000309894 SMARCA2P51531 1590 aa18.08■□□□□ 0.48
CSHL1-202ENST00000309894 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
CSHL1-202ENST00000309894 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
CSHL1-202ENST00000309894 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
CSHL1-202ENST00000309894 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
CSHL1-202ENST00000309894 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
CSHL1-202ENST00000309894 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
CSHL1-202ENST00000309894 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
CSHL1-202ENST00000309894 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
CSHL1-202ENST00000309894 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
CSHL1-202ENST00000309894 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
CSHL1-202ENST00000309894 WDR62O43379 1518 aa17.76■□□□□ 0.43
CSHL1-202ENST00000309894 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
CSHL1-202ENST00000309894 CEP164Q9UPV0 1460 aa17.6■□□□□ 0.41
CSHL1-202ENST00000309894 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
CSHL1-202ENST00000309894 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
CSHL1-202ENST00000309894 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
CSHL1-202ENST00000309894 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
CSHL1-202ENST00000309894 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
CSHL1-202ENST00000309894 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
CSHL1-202ENST00000309894 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
CSHL1-202ENST00000309894 CFTRP13569 1480 aa17.44■□□□□ 0.38
CSHL1-202ENST00000309894 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
CSHL1-202ENST00000309894 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
CSHL1-202ENST00000309894 WIZO95785 1651 aa17.36■□□□□ 0.37
CSHL1-202ENST00000309894 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.37
CSHL1-202ENST00000309894 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
CSHL1-202ENST00000309894 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
CSHL1-202ENST00000309894 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
CSHL1-202ENST00000309894 FBLN2P98095 1184 aa17.14■□□□□ 0.33
CSHL1-202ENST00000309894 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
CSHL1-202ENST00000309894 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
CSHL1-202ENST00000309894 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
CSHL1-202ENST00000309894 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSHL1-202ENST00000309894 CHD1O14646 1710 aa17.07■□□□□ 0.32
CSHL1-202ENST00000309894 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
CSHL1-202ENST00000309894 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
CSHL1-202ENST00000309894 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
CSHL1-202ENST00000309894 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
CSHL1-202ENST00000309894 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
CSHL1-202ENST00000309894 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
CSHL1-202ENST00000309894 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
CSHL1-202ENST00000309894 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
CSHL1-202ENST00000309894 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
CSHL1-202ENST00000309894 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
CSHL1-202ENST00000309894 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
CSHL1-202ENST00000309894 SOGA1O94964 1423 aa16.87■□□□□ 0.29
CSHL1-202ENST00000309894 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
CSHL1-202ENST00000309894 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
CSHL1-202ENST00000309894 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
CSHL1-202ENST00000309894 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
CSHL1-202ENST00000309894 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
CSHL1-202ENST00000309894 WDR97A6NE52 1622 aa16.77■□□□□ 0.27
CSHL1-202ENST00000309894 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
CSHL1-202ENST00000309894 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
CSHL1-202ENST00000309894 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
CSHL1-202ENST00000309894 CUX1P39880 1505 aa16.61■□□□□ 0.25
CSHL1-202ENST00000309894 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
CSHL1-202ENST00000309894 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
CSHL1-202ENST00000309894 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
CSHL1-202ENST00000309894 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
CSHL1-202ENST00000309894 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
CSHL1-202ENST00000309894 NUP160Q12769 1436 aa16.53■□□□□ 0.24
CSHL1-202ENST00000309894 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
CSHL1-202ENST00000309894 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.24
CSHL1-202ENST00000309894 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
CSHL1-202ENST00000309894 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
CSHL1-202ENST00000309894 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
CSHL1-202ENST00000309894 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
CSHL1-202ENST00000309894 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
CSHL1-202ENST00000309894 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
CSHL1-202ENST00000309894 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
CSHL1-202ENST00000309894 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms