RNA–Protein interactions for RNA: ENST00000308979.6

TLR1-201, Transcript of toll like receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TLR1, Length 2,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR1-201ENST00000308979 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
TLR1-201ENST00000308979 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
TLR1-201ENST00000308979 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
TLR1-201ENST00000308979 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
TLR1-201ENST00000308979 NACADO15069 1562 aa14.34□□□□□ -0.11
TLR1-201ENST00000308979 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
TLR1-201ENST00000308979 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
TLR1-201ENST00000308979 ABCC9O60706 1549 aa14.16□□□□□ -0.14
TLR1-201ENST00000308979 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
TLR1-201ENST00000308979 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
TLR1-201ENST00000308979 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
TLR1-201ENST00000308979 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
TLR1-201ENST00000308979 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
TLR1-201ENST00000308979 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
TLR1-201ENST00000308979 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
TLR1-201ENST00000308979 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
TLR1-201ENST00000308979 BAZ1AQ9NRL2 1556 aaPredicted RBP13.26□□□□□ -0.29
TLR1-201ENST00000308979 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
TLR1-201ENST00000308979 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
TLR1-201ENST00000308979 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
TLR1-201ENST00000308979 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
TLR1-201ENST00000308979 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
TLR1-201ENST00000308979 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
TLR1-201ENST00000308979 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
TLR1-201ENST00000308979 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
TLR1-201ENST00000308979 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
TLR1-201ENST00000308979 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
TLR1-201ENST00000308979 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
TLR1-201ENST00000308979 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
TLR1-201ENST00000308979 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
TLR1-201ENST00000308979 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
TLR1-201ENST00000308979 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
TLR1-201ENST00000308979 WIZO95785 1651 aa12.81□□□□□ -0.36
TLR1-201ENST00000308979 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
TLR1-201ENST00000308979 CFTRP13569 1480 aa12.63□□□□□ -0.39
TLR1-201ENST00000308979 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
TLR1-201ENST00000308979 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
TLR1-201ENST00000308979 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
TLR1-201ENST00000308979 CUX2O14529 1486 aa12.53□□□□□ -0.4
TLR1-201ENST00000308979 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
TLR1-201ENST00000308979 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
TLR1-201ENST00000308979 PDS5BQ9NTI5 1447 aa12.52□□□□□ -0.41
TLR1-201ENST00000308979 WDR62O43379 1518 aa12.52□□□□□ -0.41
TLR1-201ENST00000308979 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
TLR1-201ENST00000308979 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
TLR1-201ENST00000308979 BIVM-ERCC5R4GMW8 1640 aa12.42□□□□□ -0.42
TLR1-201ENST00000308979 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
TLR1-201ENST00000308979 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
TLR1-201ENST00000308979 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
TLR1-201ENST00000308979 SENP3Q9H4L4 574 aaPredicted RBP12.33□□□□□ -0.44
TLR1-201ENST00000308979 NESP48681 1621 aa12.31□□□□□ -0.44
TLR1-201ENST00000308979 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
TLR1-201ENST00000308979 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
TLR1-201ENST00000308979 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
TLR1-201ENST00000308979 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
TLR1-201ENST00000308979 TARBP1Q13395 1621 aaKnown RBP12.25□□□□□ -0.45
TLR1-201ENST00000308979 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
TLR1-201ENST00000308979 CUX1P39880 1505 aa12.2□□□□□ -0.46
TLR1-201ENST00000308979 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
TLR1-201ENST00000308979 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
TLR1-201ENST00000308979 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
TLR1-201ENST00000308979 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
TLR1-201ENST00000308979 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
TLR1-201ENST00000308979 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
TLR1-201ENST00000308979 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
TLR1-201ENST00000308979 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
TLR1-201ENST00000308979 CUL7Q14999 1698 aa12.09□□□□□ -0.47
TLR1-201ENST00000308979 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
TLR1-201ENST00000308979 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
TLR1-201ENST00000308979 EEA1Q15075 1411 aa12.02□□□□□ -0.49
TLR1-201ENST00000308979 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
TLR1-201ENST00000308979 PHF23Q9BUL5 403 aaPredicted RBP12□□□□□ -0.49
TLR1-201ENST00000308979 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
TLR1-201ENST00000308979 SOGA1O94964 1423 aa11.97□□□□□ -0.49
TLR1-201ENST00000308979 SUPT5HO00267 1087 aaKnown RBP11.96□□□□□ -0.49
TLR1-201ENST00000308979 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
TLR1-201ENST00000308979 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
TLR1-201ENST00000308979 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
TLR1-201ENST00000308979 SYNJ2O15056 1496 aa11.91□□□□□ -0.5
TLR1-201ENST00000308979 CHD1O14646 1710 aa11.9□□□□□ -0.5
TLR1-201ENST00000308979 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
TLR1-201ENST00000308979 FHAD1B1AJZ9 1412 aa11.88□□□□□ -0.51
TLR1-201ENST00000308979 KIF21BO75037 1637 aa11.88□□□□□ -0.51
TLR1-201ENST00000308979 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
TLR1-201ENST00000308979 NUP160Q12769 1436 aa11.85□□□□□ -0.51
TLR1-201ENST00000308979 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
TLR1-201ENST00000308979 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
TLR1-201ENST00000308979 RUSC2Q8N2Y8 1516 aa11.82□□□□□ -0.52
TLR1-201ENST00000308979 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
TLR1-201ENST00000308979 GRIN2AQ12879 1464 aa11.81□□□□□ -0.52
TLR1-201ENST00000308979 PRXQ9BXM0 1461 aa11.79□□□□□ -0.52
TLR1-201ENST00000308979 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
TLR1-201ENST00000308979 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
TLR1-201ENST00000308979 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
TLR1-201ENST00000308979 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
TLR1-201ENST00000308979 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
TLR1-201ENST00000308979 IGF1RP08069 1367 aa11.72□□□□□ -0.53
TLR1-201ENST00000308979 KIAA0586Q9BVV6 1533 aa11.72□□□□□ -0.53
TLR1-201ENST00000308979 EFCAB5A4FU69 1503 aa11.69□□□□□ -0.54
TLR1-201ENST00000308979 IQGAP2Q13576 1575 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms