RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 NISCHQ9Y2I1 1504 aa29.82■■■□□ 2.36
SHANK2-AS3-201ENST00000307548 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
SHANK2-AS3-201ENST00000307548 ABCC9O60706 1549 aa25.1■■□□□ 1.61
SHANK2-AS3-201ENST00000307548 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
SHANK2-AS3-201ENST00000307548 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
SHANK2-AS3-201ENST00000307548 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
SHANK2-AS3-201ENST00000307548 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
SHANK2-AS3-201ENST00000307548 NACADO15069 1562 aa24.52■■□□□ 1.52
SHANK2-AS3-201ENST00000307548 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.49
SHANK2-AS3-201ENST00000307548 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
SHANK2-AS3-201ENST00000307548 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
SHANK2-AS3-201ENST00000307548 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
SHANK2-AS3-201ENST00000307548 BICRAQ9NZM4 1560 aa23.7■■□□□ 1.38
SHANK2-AS3-201ENST00000307548 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
SHANK2-AS3-201ENST00000307548 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
SHANK2-AS3-201ENST00000307548 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
SHANK2-AS3-201ENST00000307548 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
SHANK2-AS3-201ENST00000307548 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
SHANK2-AS3-201ENST00000307548 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
SHANK2-AS3-201ENST00000307548 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
SHANK2-AS3-201ENST00000307548 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
SHANK2-AS3-201ENST00000307548 RSF1Q96T23 1441 aaPredicted RBP22.96■■□□□ 1.27
SHANK2-AS3-201ENST00000307548 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
SHANK2-AS3-201ENST00000307548 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
SHANK2-AS3-201ENST00000307548 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
SHANK2-AS3-201ENST00000307548 WIZO95785 1651 aa22.77■■□□□ 1.23
SHANK2-AS3-201ENST00000307548 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
SHANK2-AS3-201ENST00000307548 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
SHANK2-AS3-201ENST00000307548 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
SHANK2-AS3-201ENST00000307548 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
SHANK2-AS3-201ENST00000307548 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
SHANK2-AS3-201ENST00000307548 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
SHANK2-AS3-201ENST00000307548 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
SHANK2-AS3-201ENST00000307548 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
SHANK2-AS3-201ENST00000307548 CFTRP13569 1480 aa22.01■■□□□ 1.11
SHANK2-AS3-201ENST00000307548 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
SHANK2-AS3-201ENST00000307548 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
SHANK2-AS3-201ENST00000307548 NESP48681 1621 aa21.92■■□□□ 1.1
SHANK2-AS3-201ENST00000307548 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
SHANK2-AS3-201ENST00000307548 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
SHANK2-AS3-201ENST00000307548 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
SHANK2-AS3-201ENST00000307548 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
SHANK2-AS3-201ENST00000307548 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
SHANK2-AS3-201ENST00000307548 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
SHANK2-AS3-201ENST00000307548 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
SHANK2-AS3-201ENST00000307548 CUX1P39880 1505 aa21.54■■□□□ 1.04
SHANK2-AS3-201ENST00000307548 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
SHANK2-AS3-201ENST00000307548 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
SHANK2-AS3-201ENST00000307548 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
SHANK2-AS3-201ENST00000307548 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 DNMBPQ6XZF7 1577 aa21.49■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
SHANK2-AS3-201ENST00000307548 WDR62O43379 1518 aa21.43■■□□□ 1.02
SHANK2-AS3-201ENST00000307548 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
SHANK2-AS3-201ENST00000307548 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
SHANK2-AS3-201ENST00000307548 CUX2O14529 1486 aa21.27■□□□□ 0.99
SHANK2-AS3-201ENST00000307548 SOGA1O94964 1423 aa21.23■□□□□ 0.99
SHANK2-AS3-201ENST00000307548 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
SHANK2-AS3-201ENST00000307548 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
SHANK2-AS3-201ENST00000307548 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
SHANK2-AS3-201ENST00000307548 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
SHANK2-AS3-201ENST00000307548 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
SHANK2-AS3-201ENST00000307548 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
SHANK2-AS3-201ENST00000307548 EEA1Q15075 1411 aa21.08■□□□□ 0.96
SHANK2-AS3-201ENST00000307548 KIF27Q86VH2 1401 aa21.08■□□□□ 0.96
SHANK2-AS3-201ENST00000307548 ABCA5Q8WWZ7 1642 aa21.06■□□□□ 0.96
SHANK2-AS3-201ENST00000307548 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
SHANK2-AS3-201ENST00000307548 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
SHANK2-AS3-201ENST00000307548 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
SHANK2-AS3-201ENST00000307548 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.95
SHANK2-AS3-201ENST00000307548 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
SHANK2-AS3-201ENST00000307548 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
SHANK2-AS3-201ENST00000307548 IGF1RP08069 1367 aa20.96■□□□□ 0.95
SHANK2-AS3-201ENST00000307548 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
SHANK2-AS3-201ENST00000307548 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
SHANK2-AS3-201ENST00000307548 LOC105371045A0A1W2PR82 267 aa20.92■□□□□ 0.94
SHANK2-AS3-201ENST00000307548 GRIN2BQ13224 1484 aa20.92■□□□□ 0.94
SHANK2-AS3-201ENST00000307548 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
SHANK2-AS3-201ENST00000307548 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
SHANK2-AS3-201ENST00000307548 CUL7Q14999 1698 aa20.84■□□□□ 0.93
SHANK2-AS3-201ENST00000307548 KIF21BO75037 1637 aa20.83■□□□□ 0.93
SHANK2-AS3-201ENST00000307548 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
SHANK2-AS3-201ENST00000307548 GOLGA3Q08378 1498 aa20.74■□□□□ 0.91
SHANK2-AS3-201ENST00000307548 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
SHANK2-AS3-201ENST00000307548 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
SHANK2-AS3-201ENST00000307548 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
SHANK2-AS3-201ENST00000307548 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.9
SHANK2-AS3-201ENST00000307548 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
SHANK2-AS3-201ENST00000307548 CHD1O14646 1710 aa20.59■□□□□ 0.89
SHANK2-AS3-201ENST00000307548 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms