RNA–Protein interactions for RNA: ENST00000307116.6

P4HA1-202, Transcript of prolyl 4-hydroxylase subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene P4HA1, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HA1-202ENST00000307116 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
P4HA1-202ENST00000307116 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.13
P4HA1-202ENST00000307116 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
P4HA1-202ENST00000307116 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
P4HA1-202ENST00000307116 ABCC9O60706 1549 aa20.78■□□□□ 0.92
P4HA1-202ENST00000307116 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
P4HA1-202ENST00000307116 NACADO15069 1562 aa20.61■□□□□ 0.89
P4HA1-202ENST00000307116 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
P4HA1-202ENST00000307116 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
P4HA1-202ENST00000307116 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
P4HA1-202ENST00000307116 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
P4HA1-202ENST00000307116 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
P4HA1-202ENST00000307116 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
P4HA1-202ENST00000307116 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
P4HA1-202ENST00000307116 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
P4HA1-202ENST00000307116 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
P4HA1-202ENST00000307116 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
P4HA1-202ENST00000307116 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
P4HA1-202ENST00000307116 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
P4HA1-202ENST00000307116 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
P4HA1-202ENST00000307116 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
P4HA1-202ENST00000307116 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
P4HA1-202ENST00000307116 WIZO95785 1651 aa19.08■□□□□ 0.64
P4HA1-202ENST00000307116 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
P4HA1-202ENST00000307116 SUPT5HO00267 1087 aaKnown RBP19■□□□□ 0.63
P4HA1-202ENST00000307116 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
P4HA1-202ENST00000307116 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
P4HA1-202ENST00000307116 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
P4HA1-202ENST00000307116 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
P4HA1-202ENST00000307116 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
P4HA1-202ENST00000307116 CCDC88BA6NC98 1476 aa18.68■□□□□ 0.58
P4HA1-202ENST00000307116 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
P4HA1-202ENST00000307116 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
P4HA1-202ENST00000307116 CFTRP13569 1480 aa18.43■□□□□ 0.54
P4HA1-202ENST00000307116 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
P4HA1-202ENST00000307116 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
P4HA1-202ENST00000307116 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
P4HA1-202ENST00000307116 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
P4HA1-202ENST00000307116 NESP48681 1621 aa18.16■□□□□ 0.5
P4HA1-202ENST00000307116 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
P4HA1-202ENST00000307116 BIVM-ERCC5R4GMW8 1640 aa18.15■□□□□ 0.5
P4HA1-202ENST00000307116 WRNQ14191 1432 aaPredicted RBP eCLIP18.12■□□□□ 0.49
P4HA1-202ENST00000307116 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
P4HA1-202ENST00000307116 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
P4HA1-202ENST00000307116 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
P4HA1-202ENST00000307116 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
P4HA1-202ENST00000307116 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
P4HA1-202ENST00000307116 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
P4HA1-202ENST00000307116 CUX1P39880 1505 aa18.03■□□□□ 0.48
P4HA1-202ENST00000307116 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
P4HA1-202ENST00000307116 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
P4HA1-202ENST00000307116 TOPBP1Q92547 1522 aa17.96■□□□□ 0.46
P4HA1-202ENST00000307116 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
P4HA1-202ENST00000307116 WDR62O43379 1518 aa17.93■□□□□ 0.46
P4HA1-202ENST00000307116 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
P4HA1-202ENST00000307116 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
P4HA1-202ENST00000307116 EEA1Q15075 1411 aa17.88■□□□□ 0.45
P4HA1-202ENST00000307116 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
P4HA1-202ENST00000307116 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
P4HA1-202ENST00000307116 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
P4HA1-202ENST00000307116 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
P4HA1-202ENST00000307116 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
P4HA1-202ENST00000307116 SOGA1O94964 1423 aa17.74■□□□□ 0.43
P4HA1-202ENST00000307116 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
P4HA1-202ENST00000307116 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
P4HA1-202ENST00000307116 CUX2O14529 1486 aa17.71■□□□□ 0.43
P4HA1-202ENST00000307116 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
P4HA1-202ENST00000307116 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
P4HA1-202ENST00000307116 KIF21BO75037 1637 aa17.65■□□□□ 0.42
P4HA1-202ENST00000307116 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
P4HA1-202ENST00000307116 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
P4HA1-202ENST00000307116 CUL7Q14999 1698 aa17.61■□□□□ 0.41
P4HA1-202ENST00000307116 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
P4HA1-202ENST00000307116 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
P4HA1-202ENST00000307116 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
P4HA1-202ENST00000307116 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
P4HA1-202ENST00000307116 IGF1RP08069 1367 aa17.54■□□□□ 0.4
P4HA1-202ENST00000307116 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
P4HA1-202ENST00000307116 GOLGA3Q08378 1498 aa17.52■□□□□ 0.39
P4HA1-202ENST00000307116 GRIN2BQ13224 1484 aa17.52■□□□□ 0.39
P4HA1-202ENST00000307116 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
P4HA1-202ENST00000307116 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
P4HA1-202ENST00000307116 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
P4HA1-202ENST00000307116 RAPGEF2Q9Y4G8 1499 aa17.46■□□□□ 0.38
P4HA1-202ENST00000307116 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
P4HA1-202ENST00000307116 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
P4HA1-202ENST00000307116 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
P4HA1-202ENST00000307116 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.383e-7■■■□□ 16.6
P4HA1-202ENST00000307116 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
P4HA1-202ENST00000307116 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
P4HA1-202ENST00000307116 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
P4HA1-202ENST00000307116 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
P4HA1-202ENST00000307116 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
P4HA1-202ENST00000307116 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
P4HA1-202ENST00000307116 GRIN2AQ12879 1464 aa17.27■□□□□ 0.36
P4HA1-202ENST00000307116 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
P4HA1-202ENST00000307116 CHD1O14646 1710 aa17.22■□□□□ 0.35
P4HA1-202ENST00000307116 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
P4HA1-202ENST00000307116 NUP160Q12769 1436 aa17.21■□□□□ 0.34
P4HA1-202ENST00000307116 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms