RNA–Protein interactions for RNA: ENST00000305392.3

PTAFR-201, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTAFR, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-201ENST00000305392 NISCHQ9Y2I1 1504 aa30.08■■■□□ 2.41
PTAFR-201ENST00000305392 ABCC9O60706 1549 aa27.11■■□□□ 1.93
PTAFR-201ENST00000305392 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
PTAFR-201ENST00000305392 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
PTAFR-201ENST00000305392 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
PTAFR-201ENST00000305392 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
PTAFR-201ENST00000305392 NACADO15069 1562 aa25.42■■□□□ 1.66
PTAFR-201ENST00000305392 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
PTAFR-201ENST00000305392 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
PTAFR-201ENST00000305392 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
PTAFR-201ENST00000305392 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
PTAFR-201ENST00000305392 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
PTAFR-201ENST00000305392 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
PTAFR-201ENST00000305392 DCAF1Q9Y4B6 1507 aa24.7■■□□□ 1.55
PTAFR-201ENST00000305392 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
PTAFR-201ENST00000305392 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
PTAFR-201ENST00000305392 EIF4G1Q04637 1599 aaKnown RBP24.35■■□□□ 1.49
PTAFR-201ENST00000305392 CECR2Q9BXF3 1484 aa24.34■■□□□ 1.49
PTAFR-201ENST00000305392 NCAPD3P42695 1498 aa23.5■■□□□ 1.35
PTAFR-201ENST00000305392 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
PTAFR-201ENST00000305392 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
PTAFR-201ENST00000305392 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
PTAFR-201ENST00000305392 NESP48681 1621 aa23.33■■□□□ 1.32
PTAFR-201ENST00000305392 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
PTAFR-201ENST00000305392 HMGXB3Q12766 1538 aa23.3■■□□□ 1.32
PTAFR-201ENST00000305392 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
PTAFR-201ENST00000305392 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
PTAFR-201ENST00000305392 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
PTAFR-201ENST00000305392 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
PTAFR-201ENST00000305392 CUX2O14529 1486 aa23.16■■□□□ 1.3
PTAFR-201ENST00000305392 PEG3Q9GZU2 1588 aa23.15■■□□□ 1.3
PTAFR-201ENST00000305392 WIZO95785 1651 aa23.01■■□□□ 1.27
PTAFR-201ENST00000305392 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
PTAFR-201ENST00000305392 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
PTAFR-201ENST00000305392 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
PTAFR-201ENST00000305392 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
PTAFR-201ENST00000305392 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
PTAFR-201ENST00000305392 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
PTAFR-201ENST00000305392 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
PTAFR-201ENST00000305392 WDR62O43379 1518 aa22.62■■□□□ 1.21
PTAFR-201ENST00000305392 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
PTAFR-201ENST00000305392 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PTAFR-201ENST00000305392 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.21
PTAFR-201ENST00000305392 CFTRP13569 1480 aa22.56■■□□□ 1.2
PTAFR-201ENST00000305392 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
PTAFR-201ENST00000305392 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
PTAFR-201ENST00000305392 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
PTAFR-201ENST00000305392 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
PTAFR-201ENST00000305392 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
PTAFR-201ENST00000305392 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
PTAFR-201ENST00000305392 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
PTAFR-201ENST00000305392 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
PTAFR-201ENST00000305392 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
PTAFR-201ENST00000305392 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
PTAFR-201ENST00000305392 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.12
PTAFR-201ENST00000305392 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
PTAFR-201ENST00000305392 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
PTAFR-201ENST00000305392 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
PTAFR-201ENST00000305392 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
PTAFR-201ENST00000305392 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
PTAFR-201ENST00000305392 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
PTAFR-201ENST00000305392 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
PTAFR-201ENST00000305392 CHD1O14646 1710 aa21.89■■□□□ 1.1
PTAFR-201ENST00000305392 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.09
PTAFR-201ENST00000305392 FBLN2P98095 1184 aa21.88■■□□□ 1.09
PTAFR-201ENST00000305392 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
PTAFR-201ENST00000305392 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
PTAFR-201ENST00000305392 SOGA1O94964 1423 aa21.85■■□□□ 1.09
PTAFR-201ENST00000305392 CUX1P39880 1505 aa21.84■■□□□ 1.09
PTAFR-201ENST00000305392 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
PTAFR-201ENST00000305392 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
PTAFR-201ENST00000305392 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
PTAFR-201ENST00000305392 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
PTAFR-201ENST00000305392 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
PTAFR-201ENST00000305392 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
PTAFR-201ENST00000305392 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
PTAFR-201ENST00000305392 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
PTAFR-201ENST00000305392 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
PTAFR-201ENST00000305392 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
PTAFR-201ENST00000305392 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
PTAFR-201ENST00000305392 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
PTAFR-201ENST00000305392 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.04
PTAFR-201ENST00000305392 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
PTAFR-201ENST00000305392 TRHP20396 242 aaPredicted RBP21.52■■□□□ 1.04
PTAFR-201ENST00000305392 ABCA10Q8WWZ4 1543 aa21.52■■□□□ 1.03
PTAFR-201ENST00000305392 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
PTAFR-201ENST00000305392 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
PTAFR-201ENST00000305392 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
PTAFR-201ENST00000305392 ERCC6L2Q5T890 1561 aa21.41■■□□□ 1.02
PTAFR-201ENST00000305392 GRIN2AQ12879 1464 aa21.36■■□□□ 1.01
PTAFR-201ENST00000305392 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
PTAFR-201ENST00000305392 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
PTAFR-201ENST00000305392 NUP160Q12769 1436 aa21.27■■□□□ 1
PTAFR-201ENST00000305392 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
PTAFR-201ENST00000305392 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
PTAFR-201ENST00000305392 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
PTAFR-201ENST00000305392 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
PTAFR-201ENST00000305392 JPH4Q96JJ6 628 aa21.09■□□□□ 0.97
PTAFR-201ENST00000305392 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
PTAFR-201ENST00000305392 IGF1RP08069 1367 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms