RNA–Protein interactions for RNA: ENST00000302628.8

CALB2-201, Transcript of calbindin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALB2, Length 1,466 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALB2-201ENST00000302628 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
CALB2-201ENST00000302628 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
CALB2-201ENST00000302628 ABCC9O60706 1549 aa22.85■■□□□ 1.25
CALB2-201ENST00000302628 NACADO15069 1562 aa21.99■■□□□ 1.11
CALB2-201ENST00000302628 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
CALB2-201ENST00000302628 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
CALB2-201ENST00000302628 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
CALB2-201ENST00000302628 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
CALB2-201ENST00000302628 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
CALB2-201ENST00000302628 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
CALB2-201ENST00000302628 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
CALB2-201ENST00000302628 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
CALB2-201ENST00000302628 SCRIBQ14160 1630 aa21.28■■□□□ 1
CALB2-201ENST00000302628 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.97
CALB2-201ENST00000302628 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
CALB2-201ENST00000302628 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
CALB2-201ENST00000302628 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
CALB2-201ENST00000302628 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
CALB2-201ENST00000302628 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
CALB2-201ENST00000302628 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
CALB2-201ENST00000302628 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
CALB2-201ENST00000302628 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
CALB2-201ENST00000302628 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
CALB2-201ENST00000302628 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
CALB2-201ENST00000302628 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
CALB2-201ENST00000302628 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
CALB2-201ENST00000302628 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
CALB2-201ENST00000302628 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
CALB2-201ENST00000302628 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
CALB2-201ENST00000302628 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
CALB2-201ENST00000302628 WIZO95785 1651 aa20.01■□□□□ 0.79
CALB2-201ENST00000302628 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
CALB2-201ENST00000302628 NESP48681 1621 aa19.78■□□□□ 0.76
CALB2-201ENST00000302628 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
CALB2-201ENST00000302628 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
CALB2-201ENST00000302628 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
CALB2-201ENST00000302628 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
CALB2-201ENST00000302628 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
CALB2-201ENST00000302628 CFTRP13569 1480 aa19.59■□□□□ 0.73
CALB2-201ENST00000302628 CUX2O14529 1486 aa19.52■□□□□ 0.71
CALB2-201ENST00000302628 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
CALB2-201ENST00000302628 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
CALB2-201ENST00000302628 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
CALB2-201ENST00000302628 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
CALB2-201ENST00000302628 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
CALB2-201ENST00000302628 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
CALB2-201ENST00000302628 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
CALB2-201ENST00000302628 WDR62O43379 1518 aa19.35■□□□□ 0.69
CALB2-201ENST00000302628 URB2Q14146 1524 aaKnown RBP19.26■□□□□ 0.67
CALB2-201ENST00000302628 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
CALB2-201ENST00000302628 TOPBP1Q92547 1522 aa19.14■□□□□ 0.66
CALB2-201ENST00000302628 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
CALB2-201ENST00000302628 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
CALB2-201ENST00000302628 CUX1P39880 1505 aa18.99■□□□□ 0.63
CALB2-201ENST00000302628 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
CALB2-201ENST00000302628 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
CALB2-201ENST00000302628 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
CALB2-201ENST00000302628 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
CALB2-201ENST00000302628 FGD5Q6ZNL6 1462 aa18.93■□□□□ 0.62
CALB2-201ENST00000302628 SOGA1O94964 1423 aa18.91■□□□□ 0.62
CALB2-201ENST00000302628 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
CALB2-201ENST00000302628 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
CALB2-201ENST00000302628 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
CALB2-201ENST00000302628 AQRO60306 1485 aaKnown RBP eCLIP18.84■□□□□ 0.61
CALB2-201ENST00000302628 TOP2BQ02880 1626 aa18.83■□□□□ 0.6
CALB2-201ENST00000302628 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
CALB2-201ENST00000302628 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
CALB2-201ENST00000302628 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
CALB2-201ENST00000302628 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
CALB2-201ENST00000302628 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
CALB2-201ENST00000302628 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
CALB2-201ENST00000302628 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
CALB2-201ENST00000302628 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
CALB2-201ENST00000302628 ABCA5Q8WWZ7 1642 aa18.66■□□□□ 0.58
CALB2-201ENST00000302628 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
CALB2-201ENST00000302628 SNAPC4Q5SXM2 1469 aa18.64■□□□□ 0.57
CALB2-201ENST00000302628 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
CALB2-201ENST00000302628 FBLN2P98095 1184 aa18.59■□□□□ 0.57
CALB2-201ENST00000302628 CHD1O14646 1710 aa18.58■□□□□ 0.56
CALB2-201ENST00000302628 SYNJ2O15056 1496 aa18.58■□□□□ 0.56
CALB2-201ENST00000302628 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
CALB2-201ENST00000302628 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
CALB2-201ENST00000302628 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
CALB2-201ENST00000302628 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
CALB2-201ENST00000302628 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
CALB2-201ENST00000302628 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
CALB2-201ENST00000302628 IGF1RP08069 1367 aa18.44■□□□□ 0.54
CALB2-201ENST00000302628 CLASP1Q7Z460 1538 aa18.43■□□□□ 0.54
CALB2-201ENST00000302628 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
CALB2-201ENST00000302628 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
CALB2-201ENST00000302628 NUP160Q12769 1436 aa18.38■□□□□ 0.53
CALB2-201ENST00000302628 RIMBP3CA6NJZ7 1639 aa18.37■□□□□ 0.53
CALB2-201ENST00000302628 RIMBP3BA6NNM3 1639 aa18.37■□□□□ 0.53
CALB2-201ENST00000302628 RIMBP3Q9UFD9 1639 aa18.37■□□□□ 0.53
CALB2-201ENST00000302628 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
CALB2-201ENST00000302628 CUL7Q14999 1698 aa18.34■□□□□ 0.53
CALB2-201ENST00000302628 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
CALB2-201ENST00000302628 RUSC2Q8N2Y8 1516 aa18.31■□□□□ 0.52
CALB2-201ENST00000302628 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
CALB2-201ENST00000302628 CYB5RLQ6IPT4 315 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms