RNA–Protein interactions for RNA: ENST00000302378.2

NME6-201, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 4

Gene NME6, Length 490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-201ENST00000302378 NISCHQ9Y2I1 1504 aa33.76■■■■□ 3
NME6-201ENST00000302378 CCDC180Q9P1Z9 1646 aa30.26■■■□□ 2.44
NME6-201ENST00000302378 ABCC9O60706 1549 aa29.93■■■□□ 2.38
NME6-201ENST00000302378 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
NME6-201ENST00000302378 NACADO15069 1562 aa28.51■■■□□ 2.15
NME6-201ENST00000302378 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
NME6-201ENST00000302378 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
NME6-201ENST00000302378 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
NME6-201ENST00000302378 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
NME6-201ENST00000302378 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
NME6-201ENST00000302378 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
NME6-201ENST00000302378 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
NME6-201ENST00000302378 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
NME6-201ENST00000302378 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
NME6-201ENST00000302378 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
NME6-201ENST00000302378 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
NME6-201ENST00000302378 EIF4G1Q04637 1599 aaKnown RBP27.12■■□□□ 1.93
NME6-201ENST00000302378 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
NME6-201ENST00000302378 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
NME6-201ENST00000302378 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
NME6-201ENST00000302378 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
NME6-201ENST00000302378 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
NME6-201ENST00000302378 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
NME6-201ENST00000302378 HMGXB3Q12766 1538 aa26.14■■□□□ 1.78
NME6-201ENST00000302378 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
NME6-201ENST00000302378 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
NME6-201ENST00000302378 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
NME6-201ENST00000302378 NESP48681 1621 aa25.81■■□□□ 1.72
NME6-201ENST00000302378 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
NME6-201ENST00000302378 CUX2O14529 1486 aa25.75■■□□□ 1.71
NME6-201ENST00000302378 WIZO95785 1651 aa25.74■■□□□ 1.71
NME6-201ENST00000302378 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
NME6-201ENST00000302378 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
NME6-201ENST00000302378 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
NME6-201ENST00000302378 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
NME6-201ENST00000302378 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
NME6-201ENST00000302378 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
NME6-201ENST00000302378 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
NME6-201ENST00000302378 TOP2AP11388 1531 aaKnown RBP25.39■■□□□ 1.66
NME6-201ENST00000302378 CFTRP13569 1480 aa25.27■■□□□ 1.64
NME6-201ENST00000302378 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
NME6-201ENST00000302378 WDR62O43379 1518 aa25.24■■□□□ 1.63
NME6-201ENST00000302378 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
NME6-201ENST00000302378 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
NME6-201ENST00000302378 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
NME6-201ENST00000302378 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
NME6-201ENST00000302378 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
NME6-201ENST00000302378 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
NME6-201ENST00000302378 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
NME6-201ENST00000302378 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
NME6-201ENST00000302378 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
NME6-201ENST00000302378 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
NME6-201ENST00000302378 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
NME6-201ENST00000302378 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
NME6-201ENST00000302378 OSCARQ8IYS5 282 aa24.54■■□□□ 1.52
NME6-201ENST00000302378 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
NME6-201ENST00000302378 CUX1P39880 1505 aa24.42■■□□□ 1.5
NME6-201ENST00000302378 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
NME6-201ENST00000302378 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
NME6-201ENST00000302378 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
NME6-201ENST00000302378 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
NME6-201ENST00000302378 SOGA1O94964 1423 aa24.37■■□□□ 1.49
NME6-201ENST00000302378 CHD1O14646 1710 aa24.36■■□□□ 1.49
NME6-201ENST00000302378 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
NME6-201ENST00000302378 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
NME6-201ENST00000302378 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
NME6-201ENST00000302378 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
NME6-201ENST00000302378 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
NME6-201ENST00000302378 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
NME6-201ENST00000302378 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
NME6-201ENST00000302378 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
NME6-201ENST00000302378 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
NME6-201ENST00000302378 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
NME6-201ENST00000302378 GRIN2BQ13224 1484 aa24.14■■□□□ 1.46
NME6-201ENST00000302378 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
NME6-201ENST00000302378 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.46
NME6-201ENST00000302378 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
NME6-201ENST00000302378 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
NME6-201ENST00000302378 FBLN2P98095 1184 aa24.1■■□□□ 1.45
NME6-201ENST00000302378 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
NME6-201ENST00000302378 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
NME6-201ENST00000302378 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
NME6-201ENST00000302378 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
NME6-201ENST00000302378 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
NME6-201ENST00000302378 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
NME6-201ENST00000302378 ARAP1Q96P48 1450 aa24■■□□□ 1.43
NME6-201ENST00000302378 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
NME6-201ENST00000302378 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
NME6-201ENST00000302378 GRIN2AQ12879 1464 aa23.85■■□□□ 1.41
NME6-201ENST00000302378 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
NME6-201ENST00000302378 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
NME6-201ENST00000302378 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
NME6-201ENST00000302378 NUP160Q12769 1436 aa23.79■■□□□ 1.4
NME6-201ENST00000302378 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
NME6-201ENST00000302378 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
NME6-201ENST00000302378 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
NME6-201ENST00000302378 IGF1RP08069 1367 aa23.56■■□□□ 1.36
NME6-201ENST00000302378 CUL7Q14999 1698 aa23.55■■□□□ 1.36
NME6-201ENST00000302378 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
NME6-201ENST00000302378 TRHP20396 242 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms