RNA–Protein interactions for RNA: ENST00000300692.8

CD3D-201, Transcript of CD3d molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD3D, Length 861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD3D-201ENST00000300692 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
CD3D-201ENST00000300692 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
CD3D-201ENST00000300692 ABCC9O60706 1549 aa24.3■■□□□ 1.48
CD3D-201ENST00000300692 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
CD3D-201ENST00000300692 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
CD3D-201ENST00000300692 NACADO15069 1562 aa23.23■■□□□ 1.31
CD3D-201ENST00000300692 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.29
CD3D-201ENST00000300692 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
CD3D-201ENST00000300692 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
CD3D-201ENST00000300692 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
CD3D-201ENST00000300692 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
CD3D-201ENST00000300692 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
CD3D-201ENST00000300692 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
CD3D-201ENST00000300692 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
CD3D-201ENST00000300692 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
CD3D-201ENST00000300692 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
CD3D-201ENST00000300692 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
CD3D-201ENST00000300692 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
CD3D-201ENST00000300692 AEBP2Q6ZN18 517 aaPredicted RBP21.75■■□□□ 1.07
CD3D-201ENST00000300692 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
CD3D-201ENST00000300692 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
CD3D-201ENST00000300692 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
CD3D-201ENST00000300692 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
CD3D-201ENST00000300692 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
CD3D-201ENST00000300692 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
CD3D-201ENST00000300692 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
CD3D-201ENST00000300692 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
CD3D-201ENST00000300692 HMGXB3Q12766 1538 aa21.33■■□□□ 1
CD3D-201ENST00000300692 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
CD3D-201ENST00000300692 WIZO95785 1651 aa21.21■□□□□ 0.99
CD3D-201ENST00000300692 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
CD3D-201ENST00000300692 NESP48681 1621 aa21.03■□□□□ 0.96
CD3D-201ENST00000300692 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
CD3D-201ENST00000300692 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
CD3D-201ENST00000300692 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
CD3D-201ENST00000300692 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
CD3D-201ENST00000300692 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
CD3D-201ENST00000300692 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
CD3D-201ENST00000300692 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
CD3D-201ENST00000300692 CFTRP13569 1480 aa20.7■□□□□ 0.9
CD3D-201ENST00000300692 CUX2O14529 1486 aa20.69■□□□□ 0.9
CD3D-201ENST00000300692 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
CD3D-201ENST00000300692 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
CD3D-201ENST00000300692 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
CD3D-201ENST00000300692 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
CD3D-201ENST00000300692 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
CD3D-201ENST00000300692 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
CD3D-201ENST00000300692 WDR62O43379 1518 aa20.5■□□□□ 0.87
CD3D-201ENST00000300692 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
CD3D-201ENST00000300692 TOPBP1Q92547 1522 aa20.27■□□□□ 0.84
CD3D-201ENST00000300692 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
CD3D-201ENST00000300692 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
CD3D-201ENST00000300692 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
CD3D-201ENST00000300692 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
CD3D-201ENST00000300692 CUX1P39880 1505 aa20.12■□□□□ 0.81
CD3D-201ENST00000300692 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
CD3D-201ENST00000300692 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
CD3D-201ENST00000300692 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
CD3D-201ENST00000300692 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
CD3D-201ENST00000300692 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
CD3D-201ENST00000300692 SOGA1O94964 1423 aa20.01■□□□□ 0.79
CD3D-201ENST00000300692 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
CD3D-201ENST00000300692 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
CD3D-201ENST00000300692 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
CD3D-201ENST00000300692 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
CD3D-201ENST00000300692 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
CD3D-201ENST00000300692 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
CD3D-201ENST00000300692 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
CD3D-201ENST00000300692 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
CD3D-201ENST00000300692 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
CD3D-201ENST00000300692 OSCARQ8IYS5 282 aa19.83■□□□□ 0.77
CD3D-201ENST00000300692 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
CD3D-201ENST00000300692 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
CD3D-201ENST00000300692 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
CD3D-201ENST00000300692 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
CD3D-201ENST00000300692 CHD1O14646 1710 aa19.76■□□□□ 0.75
CD3D-201ENST00000300692 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
CD3D-201ENST00000300692 FBLN2P98095 1184 aa19.71■□□□□ 0.75
CD3D-201ENST00000300692 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
CD3D-201ENST00000300692 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
CD3D-201ENST00000300692 CHMP7Q8WUX9 453 aaPredicted RBP19.63■□□□□ 0.73
CD3D-201ENST00000300692 ADAMTS12P58397 1594 aa19.58■□□□□ 0.73
CD3D-201ENST00000300692 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
CD3D-201ENST00000300692 RIMBP3CA6NJZ7 1639 aa19.55■□□□□ 0.72
CD3D-201ENST00000300692 RIMBP3BA6NNM3 1639 aa19.55■□□□□ 0.72
CD3D-201ENST00000300692 RIMBP3Q9UFD9 1639 aa19.55■□□□□ 0.72
CD3D-201ENST00000300692 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
CD3D-201ENST00000300692 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
CD3D-201ENST00000300692 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
CD3D-201ENST00000300692 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
CD3D-201ENST00000300692 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
CD3D-201ENST00000300692 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
CD3D-201ENST00000300692 IGF1RP08069 1367 aa19.47■□□□□ 0.71
CD3D-201ENST00000300692 CEP170Q5SW79 1584 aa19.45■□□□□ 0.7
CD3D-201ENST00000300692 NUP160Q12769 1436 aa19.45■□□□□ 0.7
CD3D-201ENST00000300692 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
CD3D-201ENST00000300692 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
CD3D-201ENST00000300692 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
CD3D-201ENST00000300692 CUL7Q14999 1698 aa19.36■□□□□ 0.69
CD3D-201ENST00000300692 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms