RNA–Protein interactions for RNA: ENST00000298876.8

SMCO2-201, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMCO2, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-201ENST00000298876 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
SMCO2-201ENST00000298876 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
SMCO2-201ENST00000298876 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
SMCO2-201ENST00000298876 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
SMCO2-201ENST00000298876 ABCC9O60706 1549 aa17.37■□□□□ 0.37
SMCO2-201ENST00000298876 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
SMCO2-201ENST00000298876 RB1CC1Q8TDY2 1594 aa16.71■□□□□ 0.27
SMCO2-201ENST00000298876 NACADO15069 1562 aa16.66■□□□□ 0.26
SMCO2-201ENST00000298876 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
SMCO2-201ENST00000298876 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
SMCO2-201ENST00000298876 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
SMCO2-201ENST00000298876 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
SMCO2-201ENST00000298876 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
SMCO2-201ENST00000298876 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMCO2-201ENST00000298876 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
SMCO2-201ENST00000298876 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
SMCO2-201ENST00000298876 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
SMCO2-201ENST00000298876 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
SMCO2-201ENST00000298876 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
SMCO2-201ENST00000298876 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
SMCO2-201ENST00000298876 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
SMCO2-201ENST00000298876 CECR2Q9BXF3 1484 aa15.63■□□□□ 0.09
SMCO2-201ENST00000298876 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
SMCO2-201ENST00000298876 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
SMCO2-201ENST00000298876 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
SMCO2-201ENST00000298876 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
SMCO2-201ENST00000298876 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
SMCO2-201ENST00000298876 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
SMCO2-201ENST00000298876 BAZ1BQ9UIG0 1483 aaKnown RBP15.28■□□□□ 0.04
SMCO2-201ENST00000298876 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
SMCO2-201ENST00000298876 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
SMCO2-201ENST00000298876 PEG3Q9GZU2 1588 aa15.23■□□□□ 0.03
SMCO2-201ENST00000298876 FOXD1Q16676 465 aa15.18■□□□□ 0.02
SMCO2-201ENST00000298876 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
SMCO2-201ENST00000298876 WIZO95785 1651 aa15.09■□□□□ 0.01
SMCO2-201ENST00000298876 ERCC6Q03468 1493 aa15.07■□□□□ 0
SMCO2-201ENST00000298876 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
SMCO2-201ENST00000298876 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
SMCO2-201ENST00000298876 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
SMCO2-201ENST00000298876 NESP48681 1621 aa14.95□□□□□ -0.02
SMCO2-201ENST00000298876 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
SMCO2-201ENST00000298876 CUX2O14529 1486 aa14.86□□□□□ -0.03
SMCO2-201ENST00000298876 SUPT5HO00267 1087 aaKnown RBP14.84□□□□□ -0.03
SMCO2-201ENST00000298876 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
SMCO2-201ENST00000298876 CFTRP13569 1480 aa14.81□□□□□ -0.04
SMCO2-201ENST00000298876 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
SMCO2-201ENST00000298876 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
SMCO2-201ENST00000298876 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
SMCO2-201ENST00000298876 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
SMCO2-201ENST00000298876 THOC2Q8NI27 1593 aaKnown RBP14.71□□□□□ -0.05
SMCO2-201ENST00000298876 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
SMCO2-201ENST00000298876 WDR62O43379 1518 aa14.64□□□□□ -0.07
SMCO2-201ENST00000298876 ADRA2BP18089 450 aa14.62□□□□□ -0.07
SMCO2-201ENST00000298876 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
SMCO2-201ENST00000298876 ABCC8Q09428 1581 aa14.59□□□□□ -0.07
SMCO2-201ENST00000298876 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
SMCO2-201ENST00000298876 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
SMCO2-201ENST00000298876 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
SMCO2-201ENST00000298876 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
SMCO2-201ENST00000298876 IFT140Q96RY7 1462 aa14.46□□□□□ -0.09
SMCO2-201ENST00000298876 SOGA1O94964 1423 aa14.38□□□□□ -0.11
SMCO2-201ENST00000298876 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
SMCO2-201ENST00000298876 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
SMCO2-201ENST00000298876 CUX1P39880 1505 aa14.33□□□□□ -0.12
SMCO2-201ENST00000298876 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
SMCO2-201ENST00000298876 ZNF608Q9ULD9 1512 aaPredicted RBP14.32□□□□□ -0.12
SMCO2-201ENST00000298876 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
SMCO2-201ENST00000298876 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
SMCO2-201ENST00000298876 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
SMCO2-201ENST00000298876 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMCO2-201ENST00000298876 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
SMCO2-201ENST00000298876 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
SMCO2-201ENST00000298876 FBLN2P98095 1184 aa14.27□□□□□ -0.13
SMCO2-201ENST00000298876 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
SMCO2-201ENST00000298876 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
SMCO2-201ENST00000298876 TOP2BQ02880 1626 aa14.23□□□□□ -0.13
SMCO2-201ENST00000298876 CHMP7Q8WUX9 453 aaPredicted RBP14.21□□□□□ -0.13
SMCO2-201ENST00000298876 GRIN2BQ13224 1484 aa14.2□□□□□ -0.14
SMCO2-201ENST00000298876 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
SMCO2-201ENST00000298876 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
SMCO2-201ENST00000298876 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
SMCO2-201ENST00000298876 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
SMCO2-201ENST00000298876 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
SMCO2-201ENST00000298876 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
SMCO2-201ENST00000298876 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
SMCO2-201ENST00000298876 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.15
SMCO2-201ENST00000298876 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
SMCO2-201ENST00000298876 CHD1O14646 1710 aa14.07□□□□□ -0.16
SMCO2-201ENST00000298876 MSH5O43196 834 aa14.06□□□□□ -0.16
SMCO2-201ENST00000298876 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
SMCO2-201ENST00000298876 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
SMCO2-201ENST00000298876 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
SMCO2-201ENST00000298876 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
SMCO2-201ENST00000298876 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
SMCO2-201ENST00000298876 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
SMCO2-201ENST00000298876 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
SMCO2-201ENST00000298876 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
SMCO2-201ENST00000298876 IGF1RP08069 1367 aa13.94□□□□□ -0.18
SMCO2-201ENST00000298876 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
SMCO2-201ENST00000298876 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms